RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 LEFTY2O00292 366 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 SCAMP3O14828 347 aaKnown RBP11.48□□□□□ -0.57
TOP3A-210ENST00000580713 HNRNPDLO14979 420 aaKnown RBP11.48□□□□□ -0.57
TOP3A-210ENST00000580713 ADAM23O75077 832 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 GNSP15586 552 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 PFKFB1P16118 471 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 GUCY2CP25092 1073 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 GRIA2P42262 883 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 KIR2DL1P43626 348 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-210ENST00000580713 PDE6CP51160 858 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 MESP2Q0VG99 397 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 DHCR24Q15392 516 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 GAB4Q2WGN9 574 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 SYCP2LQ5T4T6 812 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 FILIP1Q7Z7B0 1213 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 SLC41A1Q8IVJ1 513 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 SYAP1Q96A49 352 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-210ENST00000580713 MYRFLQ96LU7 910 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 AK8Q96MA6 479 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 FAM124BQ9H5Z6 455 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-210ENST00000580713 DPP3Q9NY33 737 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 CYP8B1Q9UNU6 501 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 PLXNB3Q9ULL4 1909 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 GOLGA4Q13439 2230 aaKnown RBP11.47□□□□□ -0.57
TOP3A-210ENST00000580713 ANK1P16157 1881 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 IGHV1OR15-9A0A0B4J2B8 117 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 FAM237AA0A1B0GTK4 181 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 TBC1D3BA6NDS4 549 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 TRABD2BA6NFA1 517 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 PP2D1A8MPX8 630 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 KPNA7A9QM74 516 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 SLC9A3R1O14745 358 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-210ENST00000580713 NDUFS2O75306 463 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 GJB3O75712 270 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 ADRB2P07550 413 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 TCF3P15923 654 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 GABRG2P18507 467 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 TXLNAP40222 546 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 WASP42768 502 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 TNFRSF4P43489 277 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 ABCG1P45844 678 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 NDUFA8P51970 172 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 PDIA5Q14554 519 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 SV2CQ496J9 727 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 CAVIN1Q6NZI2 390 aaKnown RBP11.47□□□□□ -0.57
TOP3A-210ENST00000580713 TMPRSS7Q7RTY8 843 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 KCNK18Q7Z418 384 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 ZNF605Q86T29 641 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 MARCH9Q86YJ5 346 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 SPATA2LQ8IUW3 424 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-210ENST00000580713 SCUBE3Q8IX30 993 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 ADGRG2Q8IZP9 1017 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 IGSF22Q8N9C0 903 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 ENGASEQ8NFI3 743 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 PIP4K2CQ8TBX8 421 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 ERLEC1Q96DZ1 483 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 PRDM16Q9HAZ2 1276 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 CALCOCO1Q9P1Z2 691 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 DKK4Q9UBT3 224 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 SUSD2Q9UGT4 822 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 HPSEQ9Y251 543 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 DERAQ9Y315 318 aa11.47□□□□□ -0.57
TOP3A-210ENST00000580713 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-210ENST00000580713 TK2O00142 265 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 FAM189A1O60320 539 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 ZNF217O75362 1048 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 ADH1CP00326 375 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 ABL1P00519 1130 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 ADH5P11766 374 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 PLA2G2AP14555 144 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 HOXB2P14652 356 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 ACAT1P24752 427 aaKnown RBP11.46□□□□□ -0.57
TOP3A-210ENST00000580713 CDC25AP30304 524 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 EIF2DP41214 584 aaKnown RBP11.46□□□□□ -0.57
TOP3A-210ENST00000580713 UBA7P41226 1012 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 SYKP43405 635 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 ACOT2P49753 483 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 MYL7Q01449 175 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 GRIK2Q13002 908 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 USP49Q70CQ1 688 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 TRMT11Q7Z4G4 463 aaKnown RBP11.46□□□□□ -0.57
TOP3A-210ENST00000580713 GLRX5Q86SX6 157 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 C12orf40Q86WS4 652 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 FMR1NBQ8N0W7 255 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-210ENST00000580713 ZNF513Q8N8E2 541 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-210ENST00000580713 EPSTI1Q96J88 318 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 CCSER1Q9C0I3 900 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 ABCB6Q9NP58 842 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 SMPD4Q9NXE4 827 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 DDX43Q9NXZ2 648 aaKnown RBP11.46□□□□□ -0.57
TOP3A-210ENST00000580713 TRPM5Q9NZQ8 1165 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 LARSQ9P2J5 1176 aaKnown RBP11.46□□□□□ -0.57
TOP3A-210ENST00000580713 CPSF3Q9UKF6 684 aaKnown RBP11.46□□□□□ -0.57
TOP3A-210ENST00000580713 GTF3C4Q9UKN8 822 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 PCOLCE2Q9UKZ9 415 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 SCN1AP35498 2009 aa11.46□□□□□ -0.57
TOP3A-210ENST00000580713 PCDH15Q96QU1 1955 aa11.46□□□□□ -0.58
TOP3A-210ENST00000580713 OBSL1O75147 1896 aa11.46□□□□□ -0.58
TOP3A-210ENST00000580713 TSC2P49815 1807 aa11.46□□□□□ -0.58
TOP3A-210ENST00000580713 SHROOM3Q8TF72 1996 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms