RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 USP3Q9Y6I4 520 aa15.03■□□□□ -0
SKA2-205ENST00000580541 PLXNA3P51805 1871 aa15.03■□□□□ -0
SKA2-205ENST00000580541 ANKRD62A6NC57 917 aa15.02■□□□□ -0
SKA2-205ENST00000580541 TMCO5BA8MYB1 307 aa15.02■□□□□ -0
SKA2-205ENST00000580541 NDUFA10O95299 355 aa15.02■□□□□ -0
SKA2-205ENST00000580541 GLI1P08151 1106 aa15.02■□□□□ -0
SKA2-205ENST00000580541 H2AFZP0C0S5 128 aa15.02■□□□□ -0
SKA2-205ENST00000580541 DESP17661 470 aa15.02■□□□□ -0
SKA2-205ENST00000580541 CDC25CP30307 473 aa15.02■□□□□ -0
SKA2-205ENST00000580541 GTF2F1P35269 517 aaKnown RBP eCLIP15.02■□□□□ -01e-8■■■■■ 31.9
SKA2-205ENST00000580541 SCNN1AP37088 669 aa15.02■□□□□ -0
SKA2-205ENST00000580541 GPR15P49685 360 aa15.02■□□□□ -0
SKA2-205ENST00000580541 GFPT1Q06210 699 aaPredicted RBP15.02■□□□□ -0
SKA2-205ENST00000580541 ADIGQ0VDE8 80 aa15.02■□□□□ -0
SKA2-205ENST00000580541 SKIV2LQ15477 1246 aaKnown RBP15.02■□□□□ -0
SKA2-205ENST00000580541 PM20D1Q6GTS8 502 aa15.02■□□□□ -0
SKA2-205ENST00000580541 OR6B2Q6IFH4 312 aa15.02■□□□□ -0
SKA2-205ENST00000580541 H2AFVQ71UI9 128 aa15.02■□□□□ -0
SKA2-205ENST00000580541 SCUBE3Q8IX30 993 aa15.02■□□□□ -0
SKA2-205ENST00000580541 GPR152Q8TDT2 470 aa15.02■□□□□ -0
SKA2-205ENST00000580541 SMG7Q92540 1137 aaKnown RBP15.02■□□□□ -0
SKA2-205ENST00000580541 FBXO32Q969P5 355 aa15.02■□□□□ -0
SKA2-205ENST00000580541 RIPOR3Q96MK2 946 aa15.02■□□□□ -0
SKA2-205ENST00000580541 GUCD1Q96NT3 240 aa15.02■□□□□ -0
SKA2-205ENST00000580541 CPXM1Q96SM3 734 aa15.02■□□□□ -0
SKA2-205ENST00000580541 CDK5RAP1Q96SZ6 601 aaKnown RBP15.02■□□□□ -0
SKA2-205ENST00000580541 ADAM7Q9H2U9 754 aa15.02■□□□□ -0
SKA2-205ENST00000580541 MRPL47Q9HD33 250 aaKnown RBP15.02■□□□□ -0
SKA2-205ENST00000580541 TRPM5Q9NZQ8 1165 aa15.02■□□□□ -0
SKA2-205ENST00000580541 NCANO14594 1321 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 FAM92AA1XBS5 289 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 SOBPA7XYQ1 873 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 E5RJQ4 531 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 TULP2O00295 520 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 RFPL2O75678 378 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 LCA5LO95447 670 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 USP17L7P0C7H9 530 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 RALAP11233 206 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 MAGEA1P43355 309 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 GPC5P78333 572 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 MRPS5P82675 430 aaKnown RBP15.01□□□□□ -0.01
SKA2-205ENST00000580541 IFRD2Q12894 506 aaPredicted RBP15.01□□□□□ -0.01
SKA2-205ENST00000580541 COL19A1Q14993 1142 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 ARHGAP15Q53QZ3 475 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 SDHAF4Q5VUM1 108 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 PDZD4Q76G19 769 aaPredicted RBP15.01□□□□□ -0.01
SKA2-205ENST00000580541 GPR149Q86SP6 731 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 MCOLN2Q8IZK6 566 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 SCAMP5Q8TAC9 235 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 CTNNBL1Q8WYA6 563 aaPredicted RBP15.01□□□□□ -0.01
SKA2-205ENST00000580541 CORO1BQ9BR76 489 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 ULBP1Q9BZM6 244 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 AVENQ9NQS1 362 aaPredicted RBP15.01□□□□□ -0.01
SKA2-205ENST00000580541 TMEM30AQ9NV96 361 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 PARVAQ9NVD7 372 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 ASNSD1Q9NWL6 643 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 CYTH4Q9UIA0 394 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 SCINQ9Y6U3 715 aa15.01□□□□□ -0.01
SKA2-205ENST00000580541 ATG2AQ2TAZ0 1938 aa15□□□□□ -0.01
SKA2-205ENST00000580541 CLUHO75153 1309 aa15□□□□□ -0.01
SKA2-205ENST00000580541 SOWAHDA6NJG2 315 aa15□□□□□ -0.01
SKA2-205ENST00000580541 GLP2RO95838 553 aa15□□□□□ -0.01
SKA2-205ENST00000580541 HMGA1P17096 107 aaKnown RBP15□□□□□ -0.01
SKA2-205ENST00000580541 PFKLP17858 780 aa15□□□□□ -0.01
SKA2-205ENST00000580541 MTHFRP42898 656 aa15□□□□□ -0.01
SKA2-205ENST00000580541 GSCP56915 257 aaPredicted RBP15□□□□□ -0.01
SKA2-205ENST00000580541 SLC6A3Q01959 620 aa15□□□□□ -0.01
SKA2-205ENST00000580541 TAF10Q12962 218 aa15□□□□□ -0.01
SKA2-205ENST00000580541 PTPN20Q4JDL3 420 aa15□□□□□ -0.01
SKA2-205ENST00000580541 RARS2Q5T160 578 aaKnown RBP15□□□□□ -0.01
SKA2-205ENST00000580541 TMC5Q6UXY8 1006 aa15□□□□□ -0.01
SKA2-205ENST00000580541 MMS22LQ6ZRQ5 1243 aa15□□□□□ -0.01
SKA2-205ENST00000580541 MRPS31Q92665 395 aaKnown RBP15□□□□□ -0.01
SKA2-205ENST00000580541 CALR3Q96L12 384 aaKnown RBP15□□□□□ -0.01
SKA2-205ENST00000580541 NECTIN4Q96NY8 510 aa15□□□□□ -0.01
SKA2-205ENST00000580541 C11orf70Q9BRQ4 267 aa15□□□□□ -0.01
SKA2-205ENST00000580541 SELENOOQ9BVL4 669 aa15□□□□□ -0.01
SKA2-205ENST00000580541 ABCC13Q9NSE7 274 aa15□□□□□ -0.01
SKA2-205ENST00000580541 LCMT1Q9UIC8 334 aa15□□□□□ -0.01
SKA2-205ENST00000580541 COG5Q9UP83 839 aa15□□□□□ -0.01
SKA2-205ENST00000580541 PCDHA13Q9Y5I0 950 aa15□□□□□ -0.01
SKA2-205ENST00000580541 TRANK1O15050 2925 aa15□□□□□ -0.01
SKA2-205ENST00000580541 CAPN9O14815 690 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 LINC01565O15544 149 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 HSF2BPO75031 334 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 RHOP08100 348 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 DDX6P26196 483 aaKnown RBP eCLIP14.99□□□□□ -0.01
SKA2-205ENST00000580541 EPHA5P54756 1037 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 DAOAP59103 153 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 YWHAZP63104 245 aaKnown RBP14.99□□□□□ -0.01
SKA2-205ENST00000580541 CCDC85BQ15834 202 aaPredicted RBP14.99□□□□□ -0.01
SKA2-205ENST00000580541 SNX30Q5VWJ9 437 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 BTBD8Q5XKL5 378 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 MON1BQ7L1V2 547 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 BEND5Q7L4P6 421 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 ARCQ7LC44 396 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 KIAA1328Q86T90 577 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 XYLT1Q86Y38 959 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 TMEM139Q8IV31 216 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 ZNF276Q8N554 614 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms