RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 HMGB1P1B2RPK0 211 aaPredicted RBP9.52□□□□□ -0.89
SENP3-203ENST00000580231 SEPT4O43236 478 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 RNF8O76064 485 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 RECQL4O94761 1208 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 C6orf222P0C671 652 aaPredicted RBP9.52□□□□□ -0.89
SENP3-203ENST00000580231 GOLGA6DP0CG33 693 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 RALAP11233 206 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 CYBAP13498 195 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 DESP17661 470 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 PAX3P23760 479 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 PSMA2P25787 234 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 RFC1P35251 1148 aaPredicted RBP9.52□□□□□ -0.89
SENP3-203ENST00000580231 PCK1P35558 622 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 HSD17B3P37058 310 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 SCNN1AP37088 669 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 PSMC4P43686 418 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 MRPS6P82932 125 aaKnown RBP9.52□□□□□ -0.89
SENP3-203ENST00000580231 TMEM62Q0P6H9 643 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 CALCOCO2Q13137 446 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 NOGQ13253 232 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 PTK6Q13882 451 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 PPP1R7Q15435 360 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 SV2CQ496J9 727 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 C2CD6Q53TS8 623 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 UBXN11Q5T124 520 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 LLGL2Q6P1M3 1020 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 LIMS2Q7Z4I7 341 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 TMC3Q7Z5M5 1100 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 SESTD1Q86VW0 696 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 CCDC50Q8IVM0 306 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 CCDC89Q8N998 374 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 FAM76AQ8TAV0 307 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 PIK3R5Q8WYR1 880 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 ART4Q93070 314 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 ZMAT2Q96NC0 199 aaKnown RBP9.52□□□□□ -0.89
SENP3-203ENST00000580231 SLITRK1Q96PX8 696 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 CPXM1Q96SM3 734 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 NEUROG2Q9H2A3 272 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 PLEKHA4Q9H4M7 779 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 RUBCNLQ9H714 662 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 ETNK1Q9HBU6 452 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 GOLGA6AQ9NYA3 693 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 GRHL1Q9NZI5 618 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 HESX1Q9UBX0 185 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 GTF2IRD1Q9UHL9 959 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 SNX24Q9Y343 169 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 TRPV2Q9Y5S1 764 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 SNX9Q9Y5X1 595 aa9.52□□□□□ -0.89
SENP3-203ENST00000580231 KPNA7A9QM74 516 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 F8VP50 259 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 H0YGN5 161 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 GOLGA8SH3BPF8 625 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 M0QYV0 167 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 RARBP10826 455 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 RARGP13631 454 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 MSX1P28360 303 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 LRPAP1P30533 357 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 RPL21P46778 160 aaKnown RBP9.51□□□□□ -0.89
SENP3-203ENST00000580231 TAF6P49848 677 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 PLTPP55058 493 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 ZNF252P-AS1Q0IIN9 211 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 PDCLQ13371 301 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 TAZQ16635 292 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 TFDP3Q5H9I0 405 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 FBXO47Q5MNV8 452 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 AGBL2Q5U5Z8 902 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 ZDHHC24Q6UX98 284 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 SPOCD1Q6ZMY3 1216 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 ZNF771Q7L3S4 317 aaPredicted RBP9.51□□□□□ -0.89
SENP3-203ENST00000580231 ARCQ7LC44 396 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 TMEM110Q86TL2 294 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 TOP6BLQ8N6T0 577 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 TRPV1Q8NER1 839 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 CMASQ8NFW8 434 aaPredicted RBP9.51□□□□□ -0.89
SENP3-203ENST00000580231 RHBDD1Q8TEB9 315 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 C1orf54Q8WWF1 131 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 SNF8Q96H20 258 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 CNPY3Q9BT09 278 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 TMEM109Q9BVC6 243 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 TRIM31Q9BZY9 425 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 PABPC3Q9H361 631 aaKnown RBP9.51□□□□□ -0.89
SENP3-203ENST00000580231 FAM204AQ9H8W3 233 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 PRM3Q9NNZ6 103 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 SLC38A7Q9NVC3 462 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 CYTH4Q9UIA0 394 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 TSPAN16Q9UKR8 245 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 PLAAQ9Y263 795 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 NFS1Q9Y697 457 aa9.51□□□□□ -0.89
SENP3-203ENST00000580231 hCG_1818297A0A087WSY0 165 aa9.5□□□□□ -0.89
SENP3-203ENST00000580231 MSTNO14793 375 aa9.5□□□□□ -0.89
SENP3-203ENST00000580231 GPR182O15218 404 aa9.5□□□□□ -0.89
SENP3-203ENST00000580231 CABYRO75952 493 aa9.5□□□□□ -0.89
SENP3-203ENST00000580231 GJB6O95452 261 aa9.5□□□□□ -0.89
SENP3-203ENST00000580231 KRT1P04264 644 aa9.5□□□□□ -0.89
SENP3-203ENST00000580231 ERBB2P04626 1255 aa9.5□□□□□ -0.89
SENP3-203ENST00000580231 NUDT17P0C025 328 aa9.5□□□□□ -0.89
SENP3-203ENST00000580231 MYZAPP0CAP1 466 aa9.5□□□□□ -0.89
SENP3-203ENST00000580231 GPD1P21695 349 aa9.5□□□□□ -0.89
SENP3-203ENST00000580231 WARSP23381 471 aaKnown RBP9.5□□□□□ -0.89
SENP3-203ENST00000580231 CST5P28325 142 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms