RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 LAMTOR5O43504 91 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 ABL1P00519 1130 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 CCDC192P0DO97 292 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 SOX9P48436 509 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 IFNAR2P48551 515 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 ZNF528Q3MIS6 628 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 ZNF394Q53GI3 561 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 HECTD3Q5T447 861 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 ARHGAP17Q68EM7 881 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 TXNDC11Q6PKC3 985 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 ALYREFQ86V81 257 aaKnown RBP15.69■□□□□ 0.1
SS18-212ENST00000579061 CPA6Q8N4T0 437 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 ATP2A3Q93084 1043 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 PHOX2BQ99453 314 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 ARID3AQ99856 593 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 EBF3Q9H4W6 596 aa15.69■□□□□ 0.1
SS18-212ENST00000579061 CHORDC1Q9UHD1 332 aaPredicted RBP15.69■□□□□ 0.1
SS18-212ENST00000579061 TRDMT1O14717 391 aaKnown RBP15.68■□□□□ 0.1
SS18-212ENST00000579061 SP9P0CG40 484 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 ARSAP15289 507 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 ZXDBP98169 803 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 KCNH2Q12809 1159 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 NR1H3Q13133 447 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 EML3Q32P44 896 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 TRIM68Q6AZZ1 485 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 MAML2Q8IZL2 1156 aaPredicted RBP15.68■□□□□ 0.1
SS18-212ENST00000579061 SYNPOQ8N3V7 929 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 UBR7Q8N806 425 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 TTC8Q8TAM2 541 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 LMO3Q8TAP4 145 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 EXOC4Q96A65 974 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 NT5C1BQ96P26 610 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 UBXN6Q9BZV1 441 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 SEMA4AQ9H3S1 761 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 ECT2Q9H8V3 914 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 TLR8Q9NR97 1041 aaKnown RBP15.68■□□□□ 0.1
SS18-212ENST00000579061 LMBRD1Q9NUN5 540 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 GMIPQ9P107 970 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 SCML2Q9UQR0 700 aa15.68■□□□□ 0.1
SS18-212ENST00000579061 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.68■□□□□ 0.1
SS18-212ENST00000579061 OTOL1A6NHN0 477 aaPredicted RBP15.67■□□□□ 0.1
SS18-212ENST00000579061 SLC9A3R1O14745 358 aaPredicted RBP15.67■□□□□ 0.1
SS18-212ENST00000579061 COCHO43405 550 aa15.67■□□□□ 0.1
SS18-212ENST00000579061 AFPP02771 609 aaKnown RBP15.67■□□□□ 0.1
SS18-212ENST00000579061 MBL2P11226 248 aaPredicted RBP15.67■□□□□ 0.1
SS18-212ENST00000579061 KIF11P52732 1056 aa15.67■□□□□ 0.1
SS18-212ENST00000579061 MTAPQ13126 283 aa15.67■□□□□ 0.1
SS18-212ENST00000579061 PON2Q15165 354 aa15.67■□□□□ 0.1
SS18-212ENST00000579061 ZC3H14Q6PJT7 736 aaKnown RBP15.67■□□□□ 0.1
SS18-212ENST00000579061 ZNF276Q8N554 614 aa15.67■□□□□ 0.1
SS18-212ENST00000579061 ANKRD52Q8NB46 1076 aa15.67■□□□□ 0.1
SS18-212ENST00000579061 GBP4Q96PP9 640 aa15.67■□□□□ 0.1
SS18-212ENST00000579061 PRMT8Q9NR22 394 aaPredicted RBP15.67■□□□□ 0.1
SS18-212ENST00000579061 KIAA1257Q9ULG3 409 aa15.67■□□□□ 0.1
SS18-212ENST00000579061 CPQQ9Y646 472 aa15.67■□□□□ 0.1
SS18-212ENST00000579061 WNT6Q9Y6F9 365 aa15.67■□□□□ 0.1
SS18-212ENST00000579061 VPS13AQ96RL7 3174 aa15.67■□□□□ 0.1
SS18-212ENST00000579061 NFATC1O95644 943 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 ACO1P21399 889 aaKnown RBP15.66■□□□□ 0.1
SS18-212ENST00000579061 GJA4P35212 333 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 PSEN1P49768 467 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 SLC8A3P57103 927 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 CCINQ13939 588 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 PPP2R5DQ14738 602 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 SGO2Q562F6 1265 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 TMEM196Q5HYL7 178 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 GPRIN1Q7Z2K8 1008 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 CCDC186Q7Z3E2 898 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 SPEM1Q8N4L4 309 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 EHBP1Q8NDI1 1231 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 CHFRQ96EP1 664 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 FAM126AQ9BYI3 521 aaPredicted RBP15.66■□□□□ 0.1
SS18-212ENST00000579061 NUP62CLQ9H1M0 184 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 CYLDQ9NQC7 956 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 TBC1D14Q9P2M4 693 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 USP3Q9Y6I4 520 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 MYOFQ9NZM1 2061 aa15.66■□□□□ 0.1
SS18-212ENST00000579061 E2F8A0AVK6 867 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 TLR5O60602 858 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 PAEPP09466 180 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 VDRP11473 427 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 CCR3P51677 355 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 BCAT1P54687 386 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 GCNT1Q02742 428 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 GRSF1Q12849 480 aaKnown RBP eCLIP15.65■□□□□ 0.1
SS18-212ENST00000579061 LRMPQ12912 555 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 KLHDC10Q6PID8 442 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 PPM1KQ8N3J5 372 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 NELL1Q92832 810 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 NKD2Q969F2 451 aaPredicted RBP15.65■□□□□ 0.1
SS18-212ENST00000579061 OTUB2Q96DC9 234 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 ZFRQ96KR1 1074 aaKnown RBP15.65■□□□□ 0.1
SS18-212ENST00000579061 MED15Q96RN5 788 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 LINC00597Q9H2U6 94 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 CCSER2Q9H7U1 834 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 SMPD4Q9NXE4 827 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 CFAP97Q9P2B7 532 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 DACH1Q9UI36 760 aa15.65■□□□□ 0.1
SS18-212ENST00000579061 ATG2BQ96BY7 2078 aa15.64■□□□□ 0.09
SS18-212ENST00000579061 ZFHX2Q9C0A1 2572 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms