RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 VRTNQ9H8Y1 702 aa13.36□□□□□ -0.27
SMARCD2-207ENST00000578234 TMEM30AQ9NV96 361 aa13.36□□□□□ -0.27
SMARCD2-207ENST00000578234 CPQQ9Y646 472 aa13.36□□□□□ -0.27
SMARCD2-207ENST00000578234 MYH10P35580 1976 aa13.36□□□□□ -0.27
SMARCD2-207ENST00000578234 KMT2BQ9UMN6 2715 aaPredicted RBP13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 C4orf47A7E2U8 309 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 RTN3O95197 1032 aaPredicted RBP13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 CAVIN2O95810 425 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 CYP17A1P05093 508 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 EIF2DP41214 584 aaKnown RBP13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 DHPSP49366 369 aaPredicted RBP13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 CACNA2D1P54289 1103 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 MRPS21P82921 87 aaKnown RBP13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 DHCR24Q15392 516 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 KNOP1Q1ED39 458 aaKnown RBP13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 USP39Q53GS9 565 aaKnown RBP13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 ANO7Q6IWH7 933 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 FILIP1Q7Z7B0 1213 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 RASSF3Q86WH2 238 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 DDX42Q86XP3 938 aaKnown RBP eCLIP13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 NUP93Q8N1F7 819 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 PGBD3Q8N328 593 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 PDZD8Q8NEN9 1154 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 OVCA2Q8WZ82 227 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 EDEM2Q9BV94 578 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 B3GNT5Q9BYG0 378 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 ZNF518BQ9C0D4 1074 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 DPEP3Q9H4B8 488 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 SMPD4Q9NXE4 827 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 BCCIPQ9P287 314 aaKnown RBP eCLIP13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 NXF1Q9UBU9 619 aaKnown RBP13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 MMP17Q9ULZ9 603 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 GON4LQ3T8J9 2241 aa13.35□□□□□ -0.27
SMARCD2-207ENST00000578234 A0A0A0MRY4 1105 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 FAM237AA0A1B0GTK4 181 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 E2F8A0AVK6 867 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 BCLAF3A2AJT9 711 aaKnown RBP13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 CLDN5O00501 218 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 EXOC3O60645 756 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 PHACTR2O75167 634 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 ZNF202O95125 648 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 SLFN14P0C7P3 912 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 YWHAQP27348 245 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 NOVA1P51513 510 aaKnown RBP13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 AP3M2P53677 418 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 CLDN10P78369 228 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 CUL4BQ13620 913 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 CRY1Q16526 586 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 HSF5Q4G112 596 aaPredicted RBP13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 RHBDF2Q6PJF5 856 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 GOLGA5Q8TBA6 731 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 TMEM174Q8WUU8 243 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 PAGE5Q96GU1 130 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 CNOT6LQ96LI5 555 aaKnown RBP13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 PNKPQ96T60 521 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 LSM14BQ9BX40 385 aaKnown RBP13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 SLC39A2Q9NP94 309 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 CFAP97Q9P2B7 532 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 TBC1D14Q9P2M4 693 aa13.34□□□□□ -0.27
SMARCD2-207ENST00000578234 KHNYNO15037 678 aaKnown RBP13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 KCNK5O95279 499 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 ADH1CP00326 375 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 MBL2P11226 248 aaPredicted RBP13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 FOXC1Q12948 553 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 SNX30Q5VWJ9 437 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 DAB2IPQ5VWQ8 1189 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 PMS2CLQ68D20 193 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 KRBA2Q6ZNG9 492 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 ARMCX6Q7L4S7 300 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 PLEKHO2Q8TD55 490 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 PARD3BQ8TEW8 1205 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 PIGKQ92643 395 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 OTUB2Q96DC9 234 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 TNIP3Q96KP6 325 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 KCNK16Q96T55 309 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 DUSP9Q99956 384 aaKnown RBP13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 IL37Q9NZH6 218 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 MYO18AQ92614 2054 aaKnown RBP13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 ATP8B3O60423 1300 aa13.33□□□□□ -0.28
SMARCD2-207ENST00000578234 CACNA1GO43497 2377 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 FAM92AA1XBS5 289 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 ANTXRLA6NF34 631 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 LRRIQ3A6PVS8 624 aaPredicted RBP13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 TNFRSF10BO14763 440 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 COCHO43405 550 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 KAT7O95251 611 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 C4BPAP04003 597 aaKnown RBP13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 APODP05090 189 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 PMLP29590 882 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 TIE1P35590 1138 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 GRIA2P42262 883 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 SLC6A11P48066 632 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 CASP4P49662 377 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 TUBP50607 506 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 CDH8P55286 799 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 KDSRQ06136 332 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 MESP2Q0VG99 397 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 BIRC3Q13489 604 aa13.32□□□□□ -0.28
SMARCD2-207ENST00000578234 NCOA4Q13772 614 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms