RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 PRPF4O43172 522 aaKnown RBP eCLIP8.63□□□□□ -1.03
SKA2-203ENST00000578105 DYNC1LI2O43237 492 aaPredicted RBP8.63□□□□□ -1.03
SKA2-203ENST00000578105 ACSL3O95573 720 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 IGHA2P01877 340 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 KRT10P13645 584 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 AKR1A1P14550 325 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 CHN1P15882 459 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 WARSP23381 471 aaKnown RBP8.63□□□□□ -1.03
SKA2-203ENST00000578105 CHKAP35790 457 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 OTUD4Q01804 1114 aaKnown RBP8.63□□□□□ -1.03
SKA2-203ENST00000578105 ROR1Q01973 937 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 SLC20A2Q08357 652 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 GPS1Q13098 491 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 HIF1AQ16665 826 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 KYNUQ16719 465 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 GOLGA7BQ2TAP0 167 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 EFHC1Q5JVL4 640 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 GJC2Q5T442 439 aaPredicted RBP8.63□□□□□ -1.03
SKA2-203ENST00000578105 C9orf57Q5W0N0 161 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 MAP1SQ66K74 1059 aaPredicted RBP8.63□□□□□ -1.03
SKA2-203ENST00000578105 C6orf89Q6UWU4 347 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 OLFML1Q6UWY5 402 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 STRADAQ7RTN6 431 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 EXOC3L1Q86VI1 746 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 CDR2LQ86X02 465 aaPredicted RBP8.63□□□□□ -1.03
SKA2-203ENST00000578105 RFX6Q8HWS3 928 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 PDIK1LQ8N165 341 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 TMEM86AQ8N2M4 240 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 OTUD6BQ8N6M0 293 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 ARFGAP1Q8N6T3 406 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 GBP7Q8N8V2 638 aaPredicted RBP8.63□□□□□ -1.03
SKA2-203ENST00000578105 ACTL9Q8TC94 416 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.63□□□□□ -1.03
SKA2-203ENST00000578105 RXFP2Q8WXD0 754 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 PRCCQ92733 491 aaPredicted RBP8.63□□□□□ -1.03
SKA2-203ENST00000578105 KAT2BQ92831 832 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 FAF2Q96CS3 445 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 CABS1Q96KC9 395 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 ZNF317Q96PQ6 595 aaPredicted RBP8.63□□□□□ -1.03
SKA2-203ENST00000578105 RNF157Q96PX1 679 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 SELENOSQ9BQE4 189 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 ADAM7Q9H2U9 754 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 ZNF408Q9H9D4 720 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 SETD4Q9NVD3 440 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 SNTG2Q9NY99 539 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 EURLQ9NYK6 297 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 NKIRAS1Q9NYS0 192 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 SAMD15Q9P1V8 674 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 RABGEF1Q9UJ41 708 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 SNX9Q9Y5X1 595 aa8.63□□□□□ -1.03
SKA2-203ENST00000578105 CLUHO75153 1309 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 SF3B1O75533 1304 aaKnown RBP eCLIP8.62□□□□□ -1.037e-6■■■■■ 33.4
SKA2-203ENST00000578105 EXOC1LA0A1B0GW35 172 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 ARHGEF37A1IGU5 675 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 A8MXQ7 604 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 KPNA7A9QM74 516 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 HACD1B0YJ81 288 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 E5RJQ4 531 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 PI4K2BG5E9Z4 385 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 XPO1O14980 1071 aaKnown RBP8.62□□□□□ -1.03
SKA2-203ENST00000578105 HUS1O60921 280 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 DUSP11O75319 330 aaKnown RBP8.62□□□□□ -1.03
SKA2-203ENST00000578105 FAM155BO75949 473 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 RECQL4O94761 1208 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 FSBPO95073 299 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 CELF2O95319 508 aaKnown RBP8.62□□□□□ -1.03
SKA2-203ENST00000578105 GSTA1P08263 222 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 RBP3P10745 1247 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 PECAM1P16284 738 aaPredicted RBP8.62□□□□□ -1.03
SKA2-203ENST00000578105 DRD4P21917 467 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 IL1R2P27930 398 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 MAGEA6P43360 314 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 EIF3EP60228 445 aaKnown RBP8.62□□□□□ -1.03
SKA2-203ENST00000578105 KRT81Q14533 505 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 SNX17Q15036 470 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 DPYSL2Q16555 572 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 KIZQ2M2Z5 673 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 ATP13A4Q4VNC1 1196 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 LACTB2Q53H82 288 aaPredicted RBP8.62□□□□□ -1.03
SKA2-203ENST00000578105 EFHC2Q5JST6 749 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 TMEM63BQ5T3F8 832 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 SLC9A4Q6AI14 798 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 RGS9BPQ6ZS82 235 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 CCDC121Q6ZUS5 278 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 FAM183BPQ6ZVS7 135 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 CDKL3Q8IVW4 592 aaPredicted RBP8.62□□□□□ -1.03
SKA2-203ENST00000578105 NAT8LQ8N9F0 302 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 CCDC197Q8NCU1 140 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 APPL2Q8NEU8 664 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 EPS8L3Q8TE67 593 aaKnown RBP8.62□□□□□ -1.03
SKA2-203ENST00000578105 DYDC1Q8WWB3 177 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 KCTD13Q8WZ19 329 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 CENPIQ92674 756 aaPredicted RBP8.62□□□□□ -1.03
SKA2-203ENST00000578105 SEC16BQ96JE7 1060 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 ZNF668Q96K58 619 aaPredicted RBP8.62□□□□□ -1.03
SKA2-203ENST00000578105 PTPN18Q99952 460 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 SNX25Q9H3E2 840 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 KDM4CQ9H3R0 1056 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 ZWILCHQ9H900 591 aa8.62□□□□□ -1.03
SKA2-203ENST00000578105 ZFYVE28Q9HCC9 887 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms