RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 PIGWQ7Z7B1 504 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 ELMO2Q96JJ3 720 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 AGBL1Q96MI9 1066 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 SPATA33Q96N06 139 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 AP5M1Q9H0R1 490 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 TCF7L2Q9NQB0 619 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 TNPO2O14787 897 aaKnown RBP10.73□□□□□ -0.69
PTPRM-205ENST00000577827 ENTPD5O75356 428 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 DAB1O75553 588 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 DGKIO75912 1065 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 FAM200BP0CF97 657 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 SLC1A6P48664 564 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 SMAD1Q15797 465 aaKnown RBP10.73□□□□□ -0.69
PTPRM-205ENST00000577827 SLC15A2Q16348 729 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 IMPG1Q17R60 797 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 AADACL2Q6P093 401 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 THEM5Q8N1Q8 247 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 ULK4Q96C45 1275 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 FAM49AQ9H0Q0 323 aaPredicted RBP10.73□□□□□ -0.69
PTPRM-205ENST00000577827 SMARCAD1Q9H4L7 1026 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 BTBD7Q9P203 1132 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 VTI1BQ9UEU0 232 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 ZMYM2Q9UBW7 1377 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 C19orf81C9J6K1 198 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 ZBTB39O15060 712 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 PRPF4O43172 522 aaKnown RBP eCLIP10.73□□□□□ -0.69
PTPRM-205ENST00000577827 GRAP2O75791 330 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 VIL1P09327 827 aaKnown RBP10.73□□□□□ -0.69
PTPRM-205ENST00000577827 FCGR1AP12314 374 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 EIF4BP23588 611 aaKnown RBP10.73□□□□□ -0.69
PTPRM-205ENST00000577827 SERPINB5P36952 375 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 PPP3CAQ08209 521 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 HABP4Q5JVS0 413 aaKnown RBP10.73□□□□□ -0.69
PTPRM-205ENST00000577827 MARK2Q7KZI7 788 aaKnown RBP10.73□□□□□ -0.69
PTPRM-205ENST00000577827 SLFN11Q7Z7L1 901 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 ADCK1Q86TW2 530 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 ZNF786Q8N393 782 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 MPP4Q96JB8 637 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 ACSS3Q9H6R3 686 aa10.73□□□□□ -0.69
PTPRM-205ENST00000577827 SCHIP1Q9P0W5 487 aaPredicted RBP10.73□□□□□ -0.69
PTPRM-205ENST00000577827 M0R3G1 203 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 EML1O00423 815 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 LIASO43766 372 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 RPL10AP62906 217 aaKnown RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 MAP3K10Q02779 954 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 FAAP100Q0VG06 881 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 IYDQ6PHW0 289 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 CDR2LQ86X02 465 aaPredicted RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 ALLCQ8N6M5 410 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 OR9Q1Q8NGQ5 310 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 HPDLQ96IR7 371 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 TAAR1Q96RJ0 339 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 PRPF18Q99633 342 aaKnown RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 AGO4Q9HCK5 861 aaKnown RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 ALOX15BO15296 676 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 ITGAVP06756 1048 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 GP5P40197 560 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 PPIDQ08752 370 aaKnown RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 NSUN2Q08J23 767 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 PRKAA1Q13131 559 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 LBRQ14739 615 aaKnown RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 TRIM16LQ309B1 348 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 TMTC4Q5T4D3 741 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 B3GNT6Q6ZMB0 384 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 ARCQ7LC44 396 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 CROCCP3Q8IVE0 287 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 TMCO5AQ8N6Q1 288 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 DACT3Q96B18 629 aaPredicted RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 ARMCX1Q9P291 453 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 KIF17Q9P2E2 1029 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 FAM8A1Q9UBU6 413 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 ZNF70Q9UC06 446 aaPredicted RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 SLC4A1P02730 911 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 MPOP05164 745 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 IREB2P48200 963 aaKnown RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 MARCKSL1P49006 195 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 HADHBP55084 474 aaKnown RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 GSCP56915 257 aaPredicted RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 FMO1Q01740 532 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 KCNA1Q09470 495 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 DCTN2Q13561 401 aaKnown RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 ASTE1Q2TB18 679 aaPredicted RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 ACCSLQ4AC99 568 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 AGAP9Q5VTM2 703 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 KRT27Q7Z3Y8 459 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 FAM13CQ8NE31 585 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 RBM46Q8TBY0 533 aaKnown RBP10.72□□□□□ -0.69
PTPRM-205ENST00000577827 SH3TC2Q8TF17 1288 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 NCKIPSDQ9NZQ3 722 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 SNX13Q9Y5W8 968 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 SPEF2Q9C093 1822 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 ARHGEF9O43307 516 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 ANXA9O76027 345 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 CD4P01730 458 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 RAG1P15918 1043 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 KCNA2P16389 499 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 CHKAP35790 457 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 KCNK10P57789 538 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 TSPY1Q01534 308 aa10.72□□□□□ -0.69
PTPRM-205ENST00000577827 NFIAQ12857 509 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms