RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 RSC1A1Q92681 617 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 NELL1Q92832 810 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 MUL1Q969V5 352 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 LRRC46Q96FV0 321 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 HIST1H2AAQ96QV6 131 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 MLST8Q9BVC4 326 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 TTLL2Q9BWV7 592 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.98□□□□□ -1.93
COPS3-213ENST00000577210 SLC25A32Q9H2D1 315 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 ARHGEF3Q9NR81 526 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 RXFP3Q9NSD7 469 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 SYBUQ9NX95 663 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 RGL1Q9NZL6 768 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 SLC17A6Q9P2U8 582 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 TAGLN3Q9UI15 199 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 CCNL1Q9UK58 526 aaPredicted RBP2.98□□□□□ -1.93
COPS3-213ENST00000577210 MAFFQ9ULX9 164 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 HPSEQ9Y251 543 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 DAAM1Q9Y4D1 1078 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 WDR33Q9C0J8 1336 aaKnown RBP2.97□□□□□ -1.93
COPS3-213ENST00000577210 A1L4Q6 167 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 CCDC78A2IDD5 438 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 WDR27A2RRH5 827 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 QSOX1O00391 747 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 PPM1DO15297 605 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 TMPRSS11DO60235 418 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 TJP3O95049 919 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 ZFPL1O95159 310 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 VIPP01282 170 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 GCP02774 474 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 CSF1RP07333 972 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 NPSP0C0P6 89 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 HARSP12081 509 aaKnown RBP2.97□□□□□ -1.93
COPS3-213ENST00000577210 ABCB4P21439 1286 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 MMP8P22894 467 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 ZFP36P26651 326 aaKnown RBP2.97□□□□□ -1.93
COPS3-213ENST00000577210 UQCRC1P31930 480 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 SEC24CP53992 1094 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 PDE1AP54750 535 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 TIRAPP58753 221 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 TGFB2P61812 414 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 DGCR2P98153 550 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 DPTQ07507 201 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 SCAPQ12770 1279 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 GPS1Q13098 491 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 ATP1A4Q13733 1029 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 MPEG1Q2M385 716 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 GRAMD1BQ3KR37 738 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 AARS2Q5JTZ9 985 aaKnown RBP2.97□□□□□ -1.93
COPS3-213ENST00000577210 DEPDC1Q5TB30 811 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 KLHDC7AQ5VTJ3 777 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 ZNF280BQ86YH2 543 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 FSTL5Q8N475 847 aaPredicted RBP2.97□□□□□ -1.93
COPS3-213ENST00000577210 SLC44A3Q8N4M1 653 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 LRRC71Q8N4P6 559 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 SPATA5Q8NB90 893 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 ABHD11Q8NFV4 315 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 NEU4Q8WWR8 484 aaPredicted RBP2.97□□□□□ -1.93
COPS3-213ENST00000577210 OVCA2Q8WZ82 227 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 LPIN2Q92539 896 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 KIAA1191Q96A73 305 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 GRAMD1AQ96CP6 724 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 SLC39A13Q96H72 371 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 SORCS2Q96PQ0 1159 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 PAGR1Q9BTK6 254 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 GBA2Q9HCG7 927 aaPredicted RBP2.97□□□□□ -1.93
COPS3-213ENST00000577210 VSX1Q9NZR4 365 aaPredicted RBP2.97□□□□□ -1.93
COPS3-213ENST00000577210 SLC39A10Q9ULF5 831 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 GABRQQ9UN88 632 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 DRG1Q9Y295 367 aaKnown RBP2.97□□□□□ -1.93
COPS3-213ENST00000577210 SSX2IPQ9Y2D8 614 aa2.97□□□□□ -1.93
COPS3-213ENST00000577210 ADGRA2Q96PE1 1338 aa2.96□□□□□ -1.93
COPS3-213ENST00000577210 A0A087WV62 115 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 OR2W5A6NFC9 320 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 hCG_1984214I3L0E3 225 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 FOXN1O15353 648 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 ZSCAN9O15535 394 aaPredicted RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 NCK2O43639 380 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 TCEA3O75764 348 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 CHRM2P08172 466 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 IL6RP08887 468 aaPredicted RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 FAM163BP0C2L3 166 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 ZNF37AP17032 561 aaPredicted RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 GABRB3P28472 473 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 ATICP31939 592 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 ACVRL1P37023 503 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 GRK6P43250 576 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 ALDH18A1P54886 795 aaKnown RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 FOXO1Q12778 655 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 CBFBQ13951 182 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 PTK2BQ14289 1009 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 CSHL1Q14406 222 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 ZNF169Q14929 603 aaPredicted RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 PUM3Q15397 648 aaKnown RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 RAB30Q15771 203 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 TXNRD1Q16881 649 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 ZACNQ401N2 412 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 TREML2Q5T2D2 321 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 ATPAF1Q5TC12 328 aaPredicted RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 MANEALQ5VSG8 457 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms