RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 COPS2P61201 443 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 RPL7AP62424 266 aaKnown RBP13.06□□□□□ -0.32
TSEN54-204ENST00000577197 HADHQ16836 314 aaKnown RBP13.06□□□□□ -0.32
TSEN54-204ENST00000577197 RTP2Q5QGT7 225 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 OR6B2Q6IFH4 312 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 RTL10Q7L3V2 364 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 STRADAQ7RTN6 431 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 CREG2Q8IUH2 290 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 KATNAL2Q8IYT4 538 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 KLHL23Q8NBE8 558 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 MYRIPQ8NFW9 859 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 BCL7CQ8WUZ0 217 aaPredicted RBP13.06□□□□□ -0.32
TSEN54-204ENST00000577197 CENPIQ92674 756 aaPredicted RBP13.06□□□□□ -0.32
TSEN54-204ENST00000577197 NT5C3BQ969T7 300 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 DDX23Q9BUQ8 820 aaKnown RBP13.06□□□□□ -0.32
TSEN54-204ENST00000577197 FBXO44Q9H4M3 255 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 METTL5Q9NRN9 209 aaKnown RBP13.06□□□□□ -0.32
TSEN54-204ENST00000577197 DDX56Q9NY93 547 aaKnown RBP13.06□□□□□ -0.32
TSEN54-204ENST00000577197 IRAK3Q9Y616 596 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 EFCAB8A8MWE9 144 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 H3BNC9 293 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 TULP2O00295 520 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 CLDN5O00501 218 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 GABBR2O75899 941 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 RNF8O76064 485 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 ENDOD1O94919 500 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 RTN3O95197 1032 aaPredicted RBP13.05□□□□□ -0.32
TSEN54-204ENST00000577197 ZBED1O96006 694 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 URODP06132 367 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 PSMA2P25787 234 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 SDC4P31431 198 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 MATKP42679 507 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 TUFMP49411 452 aaKnown RBP13.05□□□□□ -0.32
TSEN54-204ENST00000577197 TKTL1P51854 596 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 MAP3K7CLP57077 242 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 DAOAP59103 153 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 RPL10AP62906 217 aaKnown RBP13.05□□□□□ -0.32
TSEN54-204ENST00000577197 YWHAZP63104 245 aaKnown RBP13.05□□□□□ -0.32
TSEN54-204ENST00000577197 ADCY1Q08828 1119 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 ZNF252P-AS1Q0IIN9 211 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 ADIGQ0VDE8 80 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 PSMD5Q16401 504 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 SLC39A12Q504Y0 691 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 C2CD6Q53TS8 623 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 KIAA1841Q6NSI8 718 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 BNIPLQ7Z465 357 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 PSTKQ8IV42 348 aaKnown RBP13.05□□□□□ -0.32
TSEN54-204ENST00000577197 ARHGAP18Q8N392 663 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 ZNF276Q8N554 614 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 FBXO22Q8NEZ5 403 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 EXD1Q8NHP7 514 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 MAIP1Q8WWC4 291 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 KHSRPQ92945 711 aaKnown RBP eCLIP13.05□□□□□ -0.32
TSEN54-204ENST00000577197 PGAP3Q96FM1 320 aaPredicted RBP13.05□□□□□ -0.32
TSEN54-204ENST00000577197 SLC2A13Q96QE2 648 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 VN1R3Q9BXE9 311 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 POPDC2Q9HBU9 364 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 RXFP1Q9HBX9 757 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 TMLHEQ9NVH6 421 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 AFF4Q9UHB7 1163 aaKnown RBP13.05□□□□□ -0.32
TSEN54-204ENST00000577197 STAP1Q9ULZ2 295 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 EFR3BQ9Y2G0 817 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 GBF1Q92538 1859 aa13.05□□□□□ -0.32
TSEN54-204ENST00000577197 PLXNA3P51805 1871 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 CTAGE15A4D2H0 777 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 MTMR11A4FU01 709 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 GOLGA8SH3BPF8 625 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 PGRMC1O00264 195 aaKnown RBP13.04□□□□□ -0.32
TSEN54-204ENST00000577197 KCNK3O14649 394 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 RIOK3O14730 519 aaKnown RBP13.04□□□□□ -0.32
TSEN54-204ENST00000577197 TNFRSF10BO14763 440 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 CTIFO43310 598 aaKnown RBP13.04□□□□□ -0.32
TSEN54-204ENST00000577197 ABLIM3O94929 683 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 CTAGE8P0CG41 777 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 PDGFRAP16234 1089 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 BDNFP23560 247 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 NOS2P35228 1153 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 CETN2P41208 172 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 PSEN1P49768 467 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 RGS7P49802 495 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 GPM6BQ13491 265 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 RAB33AQ14088 237 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 SLC25A52Q3SY17 297 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 CCDC181Q5TID7 509 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 CTAGE6Q86UF2 777 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 CEP57Q86XR8 500 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 SCUBE3Q8IX30 993 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 CTAGE4Q8IX94 777 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 ZNF461Q8TAF7 563 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 SPPL3Q8TCT6 385 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 TEKT4Q8WW24 435 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 OVCA2Q8WZ82 227 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 RUBCNQ92622 972 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 GOLGA1Q92805 767 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 RBM41Q96IZ5 413 aaKnown RBP13.04□□□□□ -0.32
TSEN54-204ENST00000577197 LPIN3Q9BQK8 851 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 LMAN2LQ9H0V9 348 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 PRDM16Q9HAZ2 1276 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 TJP2Q9UDY2 1190 aa13.04□□□□□ -0.32
TSEN54-204ENST00000577197 MTUS1Q9ULD2 1270 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms