RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.75□□□□□ -1.33
NUP88-212ENST00000576708 ANKRD63C9JTQ0 380 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 K7ENM7 598 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 SYN3O14994 580 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 FAM189A1O60320 539 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 RNGTTO60942 597 aaKnown RBP6.75□□□□□ -1.33
NUP88-212ENST00000576708 ECI2O75521 394 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 SOAT2O75908 522 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 CLTAP09496 248 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 PLCG1P19174 1290 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 MARCKSP29966 332 aaPredicted RBP6.75□□□□□ -1.33
NUP88-212ENST00000576708 NMT1P30419 496 aaKnown RBP6.75□□□□□ -1.33
NUP88-212ENST00000576708 VIPR2P41587 438 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 LIG4P49917 911 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 KARSQ15046 597 aaKnown RBP6.75□□□□□ -1.33
NUP88-212ENST00000576708 ZBTB6Q15916 424 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 ZC2HC1CQ53FD0 456 aaPredicted RBP6.75□□□□□ -1.33
NUP88-212ENST00000576708 ARL6IP4Q66PJ3 421 aaKnown RBP6.75□□□□□ -1.33
NUP88-212ENST00000576708 ZNF280DQ6N043 979 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 SLC39A4Q6P5W5 647 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 TSSK4Q6SA08 328 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 ZPBP2Q6X784 338 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 DSTYKQ6XUX3 929 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 TPRG1Q6ZUI0 275 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 PDZD4Q76G19 769 aaPredicted RBP6.75□□□□□ -1.33
NUP88-212ENST00000576708 FAM20CQ8IXL6 584 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 MYCT1Q8N699 235 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 TTC9BQ8N6N2 239 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 RSPRY1Q96DX4 576 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 DDX23Q9BUQ8 820 aaKnown RBP6.75□□□□□ -1.33
NUP88-212ENST00000576708 TIPINQ9BVW5 301 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 LTB4R2Q9NPC1 389 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 SPATA6Q9NWH7 488 aaPredicted RBP6.75□□□□□ -1.33
NUP88-212ENST00000576708 AFF4Q9UHB7 1163 aaKnown RBP6.75□□□□□ -1.33
NUP88-212ENST00000576708 TBX20Q9UMR3 447 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 KIF3AQ9Y496 699 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 CACNA1HO95180 2353 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 DMDP11532 3685 aa6.75□□□□□ -1.33
NUP88-212ENST00000576708 CFAP54Q96N23 3096 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 FAM221AA4D161 298 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 M0QZQ0 153 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 LMNAP02545 664 aaKnown RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 KRT18P05783 430 aaKnown RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 NFICP08651 508 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 ERCC5P28715 1186 aaPredicted RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 LRPAP1P30533 357 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 UBA7P41226 1012 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 ACOT2P49753 483 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 RPL6Q02878 288 aaKnown RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 PRKCQQ04759 706 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 YWHAHQ04917 246 aaPredicted RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 CSTF1Q05048 431 aaKnown RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 DUSP4Q13115 394 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 FZD5Q13467 585 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 SF3A1Q15459 793 aaKnown RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 TEAD2Q15562 447 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 STXBP5Q5T5C0 1151 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 LARP1BQ659C4 914 aaKnown RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 TPGS2Q68CL5 300 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 SCARA3Q6AZY7 606 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 JADE1Q6IE81 842 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 FAM173BQ6P4H8 233 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 VITQ6UXI7 678 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 BEND4Q6ZU67 534 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 HDXQ7Z353 690 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 KIAA2013Q8IYS2 634 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 ATAD1Q8NBU5 361 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 APPL2Q8NEU8 664 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 SHKBP1Q8TBC3 707 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 GATAD2BQ8WXI9 593 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 RAD54LQ92698 747 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 ELSPBP1Q96BH3 223 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 CALML4Q96GE6 196 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 SHDQ96IW2 340 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 EPSTI1Q96J88 318 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 FAM84AQ96KN4 292 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 ZNF512Q96ME7 567 aaPredicted RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 FIZ1Q96SL8 496 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 SPON2Q9BUD6 331 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 MSTO1Q9BUK6 570 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 LRRC3Q9BY71 257 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 KRTAP9-2Q9BYQ4 174 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 ATXN3LQ9H3M9 355 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 RPF1Q9H9Y2 349 aaKnown RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 ZNF334Q9HCZ1 680 aaPredicted RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 GDE1Q9NZC3 331 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 UBP1Q9NZI7 540 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 LARSQ9P2J5 1176 aaKnown RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 UBQLN1Q9UMX0 589 aaKnown RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 NDRG2Q9UN36 371 aaKnown RBP6.74□□□□□ -1.33
NUP88-212ENST00000576708 YIPF1Q9Y548 306 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 CLIC4Q9Y696 253 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 VPS13AQ96RL7 3174 aa6.74□□□□□ -1.33
NUP88-212ENST00000576708 PDCD11Q14690 1871 aaKnown RBP6.73□□□□□ -1.33
NUP88-212ENST00000576708 A0A0B4J269 797 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 VPS37CA5D8V6 355 aaPredicted RBP6.73□□□□□ -1.33
NUP88-212ENST00000576708 ZNF197O14709 1029 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 HNRNPDLO14979 420 aaKnown RBP6.73□□□□□ -1.33
NUP88-212ENST00000576708 OGTO15294 1046 aa6.73□□□□□ -1.33
NUP88-212ENST00000576708 LAMTOR5O43504 91 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms