RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TNRC6BQ9UPQ9 1833 aaKnown RBP9.2□□□□□ -0.94
SMG6-210ENST00000572205 BECN2A8MW95 431 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 O00370 1275 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 P4HA2O15460 535 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 DDX6P26196 483 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMG6-210ENST00000572205 TARSP26639 723 aaKnown RBP9.2□□□□□ -0.94
SMG6-210ENST00000572205 AVPR2P30518 371 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 CLCN5P51795 746 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 GCNT1Q02742 428 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 GUCA2AQ02747 115 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 TNK2Q07912 1038 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 PDE4CQ08493 712 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 VAC14Q08AM6 782 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 KCNH2Q12809 1159 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 TAF10Q12962 218 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 NCAPHQ15003 741 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 MLF2Q15773 248 aaPredicted RBP9.2□□□□□ -0.94
SMG6-210ENST00000572205 RAB41Q5JT25 222 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 TCERG1LQ5VWI1 586 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 NAIF1Q69YI7 327 aaPredicted RBP9.2□□□□□ -0.94
SMG6-210ENST00000572205 TRIM65Q6PJ69 517 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 MAML2Q8IZL2 1156 aaPredicted RBP9.2□□□□□ -0.94
SMG6-210ENST00000572205 MAB21L3Q8N8X9 362 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 PJA1Q8NG27 643 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 EZH1Q92800 747 aaPredicted RBP9.2□□□□□ -0.94
SMG6-210ENST00000572205 WBP2Q969T9 261 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 TNIP3Q96KP6 325 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 FUCA2Q9BTY2 467 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 NT5C1AQ9BXI3 368 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 RNF38Q9H0F5 515 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 NMUR1Q9HB89 426 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 PNPLA8Q9NP80 782 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 HEBP1Q9NRV9 189 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 ARHGAP26Q9UNA1 814 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 MAGED2Q9UNF1 606 aaPredicted RBP9.2□□□□□ -0.94
SMG6-210ENST00000572205 USP3Q9Y6I4 520 aa9.2□□□□□ -0.94
SMG6-210ENST00000572205 ZFHX2Q9C0A1 2572 aaPredicted RBP9.19□□□□□ -0.94
SMG6-210ENST00000572205 ATG2BQ96BY7 2078 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 GPR179Q6PRD1 2367 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 CHADO15335 359 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 CYP26A1O43174 497 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 STX10O60499 249 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 AFPP02771 609 aaKnown RBP9.19□□□□□ -0.94
SMG6-210ENST00000572205 TDGF1P13385 188 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 P4HA1P13674 534 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 CD72P21854 359 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 ERCC5P28715 1186 aaPredicted RBP9.19□□□□□ -0.94
SMG6-210ENST00000572205 ADORA2BP29275 332 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 GDI1P31150 447 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 GRIK1P39086 918 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 SOX9P48436 509 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 KIF11P52732 1056 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 SLC7A9P82251 487 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 GAS6Q14393 721 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 CCDC40Q4G0X9 1142 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 ZNF394Q53GI3 561 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 GJB7Q6PEY0 223 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 SCD5Q86SK9 330 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 NUP93Q8N1F7 819 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 ARL14EPQ8N8R7 260 aaPredicted RBP9.19□□□□□ -0.94
SMG6-210ENST00000572205 FAM200AQ8TCP9 573 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 OVCA2Q8WZ82 227 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 CLDN23Q96B33 292 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 CYFIP2Q96F07 1278 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 CYP2S1Q96SQ9 504 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 IMPG2Q9BZV3 1241 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 INTS2Q9H0H0 1204 aaKnown RBP9.19□□□□□ -0.94
SMG6-210ENST00000572205 THAP9Q9H5L6 903 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 LTB4R2Q9NPC1 389 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 SAMSN1Q9NSI8 373 aaKnown RBP9.19□□□□□ -0.94
SMG6-210ENST00000572205 GTSE1Q9NYZ3 720 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 GMIPQ9P107 970 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 UXTQ9UBK9 157 aaPredicted RBP9.19□□□□□ -0.94
SMG6-210ENST00000572205 ZMYM5Q9UJ78 669 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 PCDHGC3Q9UN70 934 aa9.19□□□□□ -0.94
SMG6-210ENST00000572205 GTPBP10A4D1E9 387 aaKnown RBP9.18□□□□□ -0.94
SMG6-210ENST00000572205 COCHO43405 550 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 GNA14O95837 355 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 FAM200BP0CF97 657 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 ARSAP15289 507 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 ZNF18P17022 549 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 CTHP32929 405 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 RPL34P49207 117 aaKnown RBP9.18□□□□□ -0.94
SMG6-210ENST00000572205 TUBP50607 506 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 MLLT6P55198 1093 aaPredicted RBP9.18□□□□□ -0.94
SMG6-210ENST00000572205 MAP3K7CLP57077 242 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 PRKCQQ04759 706 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 MESP2Q0VG99 397 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 KCNMA1Q12791 1236 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 LRMPQ12912 555 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 CKAP5Q14008 2032 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 MTF1Q14872 753 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 EML3Q32P44 896 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 SLC44A4Q53GD3 710 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 TRIM68Q6AZZ1 485 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 TPRG1Q6ZUI0 275 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 CCDC186Q7Z3E2 898 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 CELF5Q8N6W0 485 aaKnown RBP9.18□□□□□ -0.94
SMG6-210ENST00000572205 EHBP1Q8NDI1 1231 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 BPIFB1Q8TDL5 484 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms