RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 MAFBQ9Y5Q3 323 aaPredicted RBP18.2■□□□□ 0.5
SCARF1-205ENST00000571272 H7C0C1 242 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 EGFRP00533 1210 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 RXRBP28702 533 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 ATP5OP48047 213 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 BST1Q10588 318 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 TAZQ16635 292 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 DPH6Q7L8W6 267 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 KBTBD2Q8IY47 623 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 PPFIBP2Q8ND30 876 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 PRPF31Q8WWY3 499 aaKnown RBP18.2■□□□□ 0.5
SCARF1-205ENST00000571272 ACAP3Q96P50 834 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 FRMD8P1Q9BZ68 369 aaPredicted RBP18.2■□□□□ 0.5
SCARF1-205ENST00000571272 VCXQ9H320 206 aa18.2■□□□□ 0.5
SCARF1-205ENST00000571272 ABLIM1O14639 778 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 FAM189A1O60320 539 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 UGT1A9O60656 530 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 NPTXRO95502 500 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 CDH6P55285 790 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 CES4AQ5XG92 561 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 XYLT1Q86Y38 959 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.19■□□□□ 0.5
SCARF1-205ENST00000571272 UGT1A7Q9HAW7 530 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 UGT1A10Q9HAW8 530 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 UGT1A8Q9HAW9 530 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 COL4A5P29400 1685 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 I3L4J1 428 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 RNF8O76064 485 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 SLC26A11Q86WA9 606 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 RBM15BQ8NDT2 890 aaKnown RBP18.19■□□□□ 0.5
SCARF1-205ENST00000571272 CMASQ8NFW8 434 aaPredicted RBP18.19■□□□□ 0.5
SCARF1-205ENST00000571272 TEPSINQ96N21 525 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 PEBP4Q96S96 227 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 TRIM56Q9BRZ2 755 aaKnown RBP18.19■□□□□ 0.5
SCARF1-205ENST00000571272 KRT82Q9NSB4 513 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.19■□□□□ 0.5
SCARF1-205ENST00000571272 SCOCQ9UIL1 159 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 FZD1Q9UP38 647 aa18.19■□□□□ 0.5
SCARF1-205ENST00000571272 AP1B1Q10567 949 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 TMEM132BQ14DG7 1078 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 CHI3L2Q15782 390 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 TTC39BQ5VTQ0 682 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-205ENST00000571272 SLC30A9Q6PML9 568 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 CCDC110Q8TBZ0 833 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 XYLT2Q9H1B5 865 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 TMEM134Q9H6X4 195 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 PAPOLBQ9NRJ5 636 aaKnown RBP18.18■□□□□ 0.5
SCARF1-205ENST00000571272 ZNF214Q9UL59 606 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-205ENST00000571272 C2CD2Q9Y426 696 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 MAP3K7O43318 606 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 TOM1L1O75674 476 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 TRUB2O95900 331 aaKnown RBP18.18■□□□□ 0.5
SCARF1-205ENST00000571272 FESP07332 822 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 KCNA3P22001 575 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 AP3M2P53677 418 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 KCNJ11Q14654 390 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 NBPF20Q3BBV1 942 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 OR52E8Q6IFG1 317 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 CEP120Q8N960 986 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 SMC1BQ8NDV3 1235 aa18.18■□□□□ 0.5
SCARF1-205ENST00000571272 MMADHCQ9H3L0 296 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-205ENST00000571272 KIF3CO14782 793 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 MSCO60682 206 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 TSHRP16473 764 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 MRPS5P82675 430 aaKnown RBP18.17■□□□□ 0.5
SCARF1-205ENST00000571272 CDO1Q16878 200 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 E2F7Q96AV8 911 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 THTPAQ9BU02 230 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 MYOZ2Q9NPC6 264 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 ZC3H7BQ9UGR2 993 aaKnown RBP18.17■□□□□ 0.5
SCARF1-205ENST00000571272 PLLPQ9Y342 182 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 TTLL3Q9Y4R7 772 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 SMAPO00193 183 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 KCNN4O15554 427 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 HMGCS2P54868 508 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 ALDH18A1P54886 795 aaKnown RBP18.17■□□□□ 0.5
SCARF1-205ENST00000571272 AQP5P55064 265 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 YWHAZP63104 245 aaKnown RBP18.17■□□□□ 0.5
SCARF1-205ENST00000571272 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
SCARF1-205ENST00000571272 MTMR14Q8NCE2 650 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 REPS2Q8NFH8 660 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 FNIP1Q8TF40 1166 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 DDX50Q9BQ39 737 aaKnown RBP18.17■□□□□ 0.5
SCARF1-205ENST00000571272 HMGXB4Q9UGU5 601 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 ASB3Q9Y575 518 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 HEY1Q9Y5J3 304 aa18.17■□□□□ 0.5
SCARF1-205ENST00000571272 AHCYL1O43865 530 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 KRT37O76014 449 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 TOP3BO95985 862 aaKnown RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 SNRPAP09012 282 aaKnown RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 UBTFL6P0CB48 400 aaPredicted RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 CALRP27797 417 aaKnown RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 STIP1P31948 543 aaKnown RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 PAPOLAP51003 745 aaKnown RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 IRX4P78413 519 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 FAM102AQ5T9C2 384 aaPredicted RBP18.16■□□□□ 0.5
SCARF1-205ENST00000571272 ZCCHC23Q6ZST2 131 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 TMPRSS6Q8IU80 811 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 ARHGAP24Q8N264 748 aa18.16■□□□□ 0.5
SCARF1-205ENST00000571272 SLC25A41Q8N5S1 370 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms