RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 KIR2DL1P43626 348 aaPredicted RBP18.64■□□□□ 0.57
CIITA-206ENST00000571190 PGFP49763 221 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 DLG4P78352 724 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 USP39Q53GS9 565 aaKnown RBP18.64■□□□□ 0.57
CIITA-206ENST00000571190 SNX30Q5VWJ9 437 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 FUKQ8N0W3 1084 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 ALLCQ8N6M5 410 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 KIAA0895Q8NCT3 520 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 ZMIZ2Q8NF64 920 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 OLIG1Q8TAK6 271 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 OVCA2Q8WZ82 227 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 FBXO32Q969P5 355 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 SERTAD1Q9UHV2 236 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 E2F8A0AVK6 867 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 FAM92AA1XBS5 289 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 SGK1O00141 431 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 ACTN4O43707 911 aaKnown RBP18.63■□□□□ 0.57
CIITA-206ENST00000571190 BEST1O76090 585 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 RTN3O95197 1032 aaPredicted RBP18.63■□□□□ 0.57
CIITA-206ENST00000571190 KAT7O95251 611 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 EIF2DP41214 584 aaKnown RBP18.63■□□□□ 0.57
CIITA-206ENST00000571190 ME1P48163 572 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 SLC5A3P53794 718 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 BIRC3Q13489 604 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 NCOA4Q13772 614 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 PKP1Q13835 747 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 ZNF699Q32M78 642 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 ZNF667Q5HYK9 610 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 LY6G5CQ5SRR4 150 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 RNF43Q68DV7 783 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 SCARA5Q6ZMJ2 495 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 TXNDC5Q8NBS9 432 aaKnown RBP18.63■□□□□ 0.57
CIITA-206ENST00000571190 PDZD8Q8NEN9 1154 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 TMEM174Q8WUU8 243 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 KCTD10Q9H3F6 313 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 CCSER2Q9H7U1 834 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 ZDHHC4Q9NPG8 344 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 FAM13BQ9NYF5 915 aa18.63■□□□□ 0.57
CIITA-206ENST00000571190 DENND4CQ5VZ89 1909 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 ADAM23O75077 832 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 KCNK5O95279 499 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 KLF8O95600 359 aaPredicted RBP18.62■□□□□ 0.57
CIITA-206ENST00000571190 SLFN14P0C7P3 912 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 ADH5P11766 374 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 TIE1P35590 1138 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 AP3M2P53677 418 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 C1orf220Q5T0J3 134 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 HECTD3Q5T447 861 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 ACOT1Q86TX2 421 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 DDX42Q86XP3 938 aaKnown RBP eCLIP18.62■□□□□ 0.57
CIITA-206ENST00000571190 SLC9A9Q8IVB4 645 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 ETFBKMTQ8IXQ9 262 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 PAGE5Q96GU1 130 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 SMOQ99835 787 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 EDEM2Q9BV94 578 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 DMAP1Q9NPF5 467 aaPredicted RBP18.62■□□□□ 0.57
CIITA-206ENST00000571190 ARHGEF4Q9NR80 690 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 GMIPQ9P107 970 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 TBC1D14Q9P2M4 693 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 HMGXB4Q9UGU5 601 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 RCOR1Q9UKL0 485 aa18.62■□□□□ 0.57
CIITA-206ENST00000571190 EPG5Q9HCE0 2579 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 LNP1A1A4G5 178 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 C4orf47A7E2U8 309 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 PATE3B3GLJ2 98 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 ADH1CP00326 375 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 APODP05090 189 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 GRIA2P42262 883 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 KDSRQ06136 332 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 ORC1Q13415 861 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 ZACNQ401N2 412 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 BBS7Q8IWZ6 715 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 FRMD1Q8N878 549 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 GOLGA5Q8TBA6 731 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 RLN3Q8WXF3 142 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 SMARCD1Q96GM5 515 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 TNIP3Q96KP6 325 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 DUSP9Q99956 384 aaKnown RBP18.61■□□□□ 0.57
CIITA-206ENST00000571190 MED10Q9BTT4 135 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 CSNK1G1Q9HCP0 422 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 HCN2Q9UL51 889 aa18.61■□□□□ 0.57
CIITA-206ENST00000571190 CDX4O14627 284 aaPredicted RBP18.6■□□□□ 0.57
CIITA-206ENST00000571190 HOXC11O43248 304 aaPredicted RBP18.6■□□□□ 0.57
CIITA-206ENST00000571190 GREM1O60565 184 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 AP1G2O75843 785 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 CCDC130P13994 396 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 P2RY2P41231 377 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 TNFRSF4P43489 277 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 TUBP50607 506 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 SHC2P98077 582 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 DNM1Q05193 864 aaKnown RBP18.6■□□□□ 0.57
CIITA-206ENST00000571190 ST3GAL2Q16842 350 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 KMT5BQ4FZB7 885 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 HSF5Q4G112 596 aaPredicted RBP18.6■□□□□ 0.57
CIITA-206ENST00000571190 C11orf74Q86VG3 221 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 TTC30AQ86WT1 665 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 TMEM25Q86YD3 366 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 CRYBG2Q8N1P7 616 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 NAT16Q8N8M0 369 aa18.6■□□□□ 0.57
CIITA-206ENST00000571190 OTUB2Q96DC9 234 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms