RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ADAMTS20P59510 1910 aa12.86□□□□□ -0.35
CAPN3-220ENST00000569827 LOC400499M0QZD8 3231 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.85□□□□□ -0.35
CAPN3-220ENST00000569827 ZNF233A6NK53 670 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 MAP3K13O43283 966 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 CLSTN1O94985 981 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 OLFM2O95897 454 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 CFIP05156 583 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 ADH5P11766 374 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 CASP1P29466 404 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 GNL1P36915 607 aaPredicted RBP12.85□□□□□ -0.35
CAPN3-220ENST00000569827 P2RY2P41231 377 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 MRPS21P82921 87 aaKnown RBP12.85□□□□□ -0.35
CAPN3-220ENST00000569827 DUOXA2Q1HG44 320 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 SCARA5Q6ZMJ2 495 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 CCDC73Q6ZRK6 1079 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 TRAPPC11Q7Z392 1133 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 NELFCDQ8IXH7 590 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 WHAMMQ8TF30 809 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 ZFRQ96KR1 1074 aaKnown RBP12.85□□□□□ -0.35
CAPN3-220ENST00000569827 KCNK16Q96T55 309 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 B3GNT5Q9BYG0 378 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 TRIM9Q9C026 710 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 NXF1Q9UBU9 619 aaKnown RBP12.85□□□□□ -0.35
CAPN3-220ENST00000569827 KLK13Q9UKR3 277 aa12.85□□□□□ -0.35
CAPN3-220ENST00000569827 ACACAQ13085 2346 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 TRIM66O15016 1216 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 COCHO43405 550 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 ALDH1A2O94788 518 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 ENGP17813 658 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 PTPN1P18031 435 aaKnown RBP12.84□□□□□ -0.35
CAPN3-220ENST00000569827 TNNI1P19237 187 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 KIR2DL1P43626 348 aaPredicted RBP12.84□□□□□ -0.35
CAPN3-220ENST00000569827 CASP4P49662 377 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 PGFP49763 221 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 CDH8P55286 799 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 MYL6P60660 151 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 ORC1Q13415 861 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 ALCAMQ13740 583 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 COL9A2Q14055 689 aaPredicted RBP12.84□□□□□ -0.35
CAPN3-220ENST00000569827 SNRNP35Q16560 246 aaKnown RBP12.84□□□□□ -0.35
CAPN3-220ENST00000569827 MAP7D1Q3KQU3 841 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 TDRD10Q5VZ19 366 aaKnown RBP12.84□□□□□ -0.35
CAPN3-220ENST00000569827 ERICH6BQ5W0A0 696 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 LPCAT2Q7L5N7 544 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 DPH6Q7L8W6 267 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 MIB1Q86YT6 1006 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 WDR49Q8IV35 697 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 BBS7Q8IWZ6 715 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 CCDC65Q8IXS2 484 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 PHTF2Q8N3S3 785 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 SCAMP5Q8TAC9 235 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 ZNF516Q92618 1163 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 GATA6Q92908 595 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 FBXO32Q969P5 355 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 SPACA7Q96KW9 195 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 GTPBP2Q9BX10 602 aaKnown RBP12.84□□□□□ -0.35
CAPN3-220ENST00000569827 SLC6A17Q9H1V8 727 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 SMYD3Q9H7B4 428 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 CCSER2Q9H7U1 834 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 CHORDC1Q9UHD1 332 aaPredicted RBP12.84□□□□□ -0.35
CAPN3-220ENST00000569827 HCN2Q9UL51 889 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 CABIN1Q9Y6J0 2220 aa12.84□□□□□ -0.35
CAPN3-220ENST00000569827 CKAP5Q14008 2032 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 A8MXQ7 604 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 ADH1CP00326 375 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 CEACAM1P13688 526 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 CSRP1P21291 193 aaKnown RBP12.83□□□□□ -0.36
CAPN3-220ENST00000569827 SYT1P21579 422 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 PDE6CP51160 858 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 TNNC1P63316 161 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 FAM193AP78312 1265 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 NOP14P78316 857 aaKnown RBP12.83□□□□□ -0.36
CAPN3-220ENST00000569827 ASIC1P78348 528 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 MAPRE1Q15691 268 aaKnown RBP12.83□□□□□ -0.36
CAPN3-220ENST00000569827 ANO4Q32M45 955 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 WDR72Q3MJ13 1102 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 EOGTQ5NDL2 527 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 LYSMD4Q5XG99 296 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 C11orf74Q86VG3 221 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 B3GALNT2Q8NCR0 500 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 ZCCHC14Q8WYQ9 949 aaKnown RBP12.83□□□□□ -0.36
CAPN3-220ENST00000569827 C8orf48Q96LL4 319 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 SLITRK1Q96PX8 696 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 ACOX2Q99424 681 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 CGRRF1Q99675 332 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 MED10Q9BTT4 135 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 NUSAP1Q9BXS6 441 aaKnown RBP12.83□□□□□ -0.36
CAPN3-220ENST00000569827 GZF1Q9H116 711 aaPredicted RBP12.83□□□□□ -0.36
CAPN3-220ENST00000569827 POLMQ9NP87 494 aaPredicted RBP12.83□□□□□ -0.36
CAPN3-220ENST00000569827 GMIPQ9P107 970 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 ITPR1Q14643 2758 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 BPTFQ12830 3046 aa12.83□□□□□ -0.36
CAPN3-220ENST00000569827 APC2O95996 2303 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 TBC1D3BA6NDS4 549 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 SLC9A3R1O14745 358 aaPredicted RBP12.82□□□□□ -0.36
CAPN3-220ENST00000569827 TGFB1I1O43294 461 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 TULP3O75386 442 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 GABRG2P18507 467 aa12.82□□□□□ -0.36
CAPN3-220ENST00000569827 YWHAQP27348 245 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms