RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 CEP57Q86XR8 500 aa11.46□□□□□ -0.58
PDXDC1-216ENST00000569715 MAGOHBQ96A72 148 aaKnown RBP11.46□□□□□ -0.58
PDXDC1-216ENST00000569715 ULBP1Q9BZM6 244 aa11.46□□□□□ -0.58
PDXDC1-216ENST00000569715 LRRC4Q9HBW1 653 aa11.46□□□□□ -0.58
PDXDC1-216ENST00000569715 RNF8O76064 485 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 PAX3P23760 479 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 SNX16P57768 344 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 PITX1P78337 314 aaPredicted RBP11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 CLUL1Q15846 466 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 FAM171A1Q5VUB5 890 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 CNKSR3Q6P9H4 555 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 DDX42Q86XP3 938 aaKnown RBP eCLIP11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 THEM5Q8N1Q8 247 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 HSPH1Q92598 858 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 FAM149B1Q96BN6 582 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 GDF3Q9NR23 364 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 CDKN2BP42772 138 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 CARSP49589 748 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 CTCFP49711 727 aaPredicted RBP11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 HDAC4P56524 1084 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 MRPS5P82675 430 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 TSPY1Q01534 308 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 SNX1Q13596 522 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 IKBKEQ14164 716 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 CYP1B1Q16678 543 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 VARS2Q5ST30 1063 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 RCOR2Q8IZ40 523 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 SIX6OS1Q8N1H7 587 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 RBM41Q96IZ5 413 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 C11orf84Q9BUA3 381 aaPredicted RBP11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 CSNK1G1Q9HCP0 422 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 ARFGAP3Q9NP61 516 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 GPATCH2LQ9NWQ4 482 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 PTPRSQ13332 1948 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 GALTP07902 379 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 DEFB103AP81534 67 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 DR1Q01658 176 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 HADHQ16836 314 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 SLC39A12Q504Y0 691 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 STKLD1Q8NE28 680 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 MTUS1Q9ULD2 1270 aa11.45□□□□□ -0.58
PDXDC1-216ENST00000569715 hCG_1818297A0A087WSY0 165 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 HOXA2O43364 376 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 SASH3O75995 380 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 OAZ2O95190 189 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 USP17L7P0C7H9 530 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 PCK1P35558 622 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 SCNN1AP37088 669 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 PTGIRP43119 386 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 ACAP1Q15027 740 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 RAB41Q5JT25 222 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 OTUD1Q5VV17 481 aaPredicted RBP11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 FAM117BQ6P1L5 589 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 CCDC137Q6PK04 289 aaKnown RBP11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 TAS1R1Q7RTX1 841 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 DEFB106AQ8N104 65 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 HNRNPLLQ8WVV9 542 aaKnown RBP11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 ZBTB9Q96C00 473 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 DDX56Q9NY93 547 aaKnown RBP11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 FAN1Q9Y2M0 1017 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 ALPK3Q96L96 1907 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 YJEFN3A6XGL0 299 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 E7ENQ6 273 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 ALDH2P05091 517 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 KRT7P08729 469 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 ACRP10323 421 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 CYP2F1P24903 491 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 COILP38432 576 aaPredicted RBP11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 SCYL2Q6P3W7 929 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 BHLHA9Q7RTU4 235 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 NECAB2Q7Z6G3 386 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 LRRC43Q8N309 656 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 C12orf50Q8NA57 414 aaPredicted RBP11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 IFT81Q8WYA0 676 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 TBCBQ99426 244 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 MRPL9Q9BYD2 267 aaKnown RBP11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 TRIM31Q9BZY9 425 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 ZMYND15Q9H091 742 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 ZNF638Q14966 1978 aaKnown RBP11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 MYO16Q9Y6X6 1858 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 ARHGEF37A1IGU5 675 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 BHMG1C9JSJ3 638 aaPredicted RBP11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 TRAPPC3O43617 180 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 TIMP1P01033 207 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 CHRNA3P32297 505 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 DAOAP59103 153 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 RTP2Q5QGT7 225 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 SYPL2Q5VXT5 272 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 FUT10Q6P4F1 479 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 JAMLQ86YT9 394 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 CCDC26Q8TAB7 109 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 HAUS1Q96CS2 278 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 MAGEB5Q9BZ81 275 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 DCLK3Q9C098 648 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 ZCWPW1Q9H0M4 648 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 NFU1Q9UMS0 254 aa11.44□□□□□ -0.58
PDXDC1-216ENST00000569715 HSF2BPO75031 334 aa11.43□□□□□ -0.58
PDXDC1-216ENST00000569715 ERLIN1O75477 346 aa11.43□□□□□ -0.58
PDXDC1-216ENST00000569715 DGKIO75912 1065 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms