RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 LRRIQ4A6NIV6 560 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 GFRA2O00451 464 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 SLC9A3R1O14745 358 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 LZTS3O60299 673 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 ADH1CP00326 375 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 HAPLN1P10915 354 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 ADH5P11766 374 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 PFKLP17858 780 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 ABCB4P21439 1286 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 RBMS1P29558 406 aaKnown RBP7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 HSPA4P34932 840 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 GRM5P41594 1212 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 LIFRP42702 1097 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 DUSP3P51452 185 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 TPMTP51580 245 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 YARSP54577 528 aaKnown RBP7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 ZXDBP98169 803 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 ATP2C1P98194 919 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 SMARCB1Q12824 385 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 PPP2R5CQ13362 524 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 MORC3Q14149 939 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 SHBQ15464 509 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 EGFLAMQ63HQ2 1017 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 DHX32Q7L7V1 743 aaKnown RBP7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 FILIP1Q7Z7B0 1213 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 ZBTB8OSQ8IWT0 167 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 ARL14EPQ8N8R7 260 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 TERB1Q8NA31 727 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 ETNPPLQ8TBG4 499 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 RILPL2Q969X0 211 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 C18orf25Q96B23 403 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 TRMT2BQ96GJ1 504 aaKnown RBP7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 MYRFLQ96LU7 910 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 ACOX2Q99424 681 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 LXNQ9BS40 222 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 CCDC94Q9BW85 323 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 C2orf40Q9H1Z8 148 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 TRPC7Q9HCX4 862 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 CNTN3Q9P232 1028 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 TJP2Q9UDY2 1190 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 PCDHGA8Q9Y5G5 932 aa7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 V9GY48 417 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-217ENST00000569429 PCSK5Q92824 1860 aa7.15□□□□□ -1.27
HERPUD1-217ENST00000569429 CYP3A7-CYP3A51PA0A087WV96 503 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 LEFTY2O00292 366 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 SH2B2O14492 632 aaPredicted RBP7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 ZBTB39O15060 712 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 VILLO15195 856 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 EDN1P05305 212 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 RNF224P0DH78 156 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 HDCP19113 662 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 CYP3A7P24462 503 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 GNA11P29992 359 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 MLLT3P42568 568 aaPredicted RBP7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 PDE6CP51160 858 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 GAD2Q05329 585 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 KCNB1Q14721 858 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 NOLC1Q14978 699 aaKnown RBP eCLIP7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 CLCA4Q14CN2 919 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 PROX2Q3B8N5 592 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 SLC39A12Q504Y0 691 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 C10orf76Q5T2E6 689 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 SFMBT2Q5VUG0 894 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 CASC1Q6TDU7 716 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 LAYNQ6UX15 382 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 APBB1IPQ7Z5R6 666 aaPredicted RBP7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 CLEC14AQ86T13 490 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 NSUN7Q8NE18 718 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 OR10T2Q8NGX3 314 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 PRR11Q96HE9 360 aaPredicted RBP7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 MKRN2Q9H000 416 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 CCDC113Q9H0I3 377 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 ZCWPW1Q9H0M4 648 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 POLR3FQ9H1D9 316 aaPredicted RBP7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 ZSWIM4Q9H7M6 989 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 RBM28Q9NW13 759 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 DEC1Q9P2X7 70 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 TUBD1Q9UJT1 453 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 MAGED2Q9UNF1 606 aaPredicted RBP7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 SATB2Q9UPW6 733 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 USP20Q9Y2K6 914 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 PCDHB6Q9Y5E3 794 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 RAD54BQ9Y620 910 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 SLC12A7Q9Y666 1083 aa7.14□□□□□ -1.27
HERPUD1-217ENST00000569429 ZNF469Q96JG9 3925 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 A0A087X0B3 334 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 A0A1W2PNU3 283 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 HIP1O00291 1037 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 HOXC11O43248 304 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 TULP3O75386 442 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 CSO75390 466 aaKnown RBP7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 NOL4O94818 638 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 DDAH2O95865 285 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 CD27P26842 260 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 EPHA8P29322 1005 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 LRPAP1P30533 357 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 ZNF132P52740 706 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 EPHA7Q15375 998 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms