RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 SUSD3Q96L08 255 aa9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 COLEC11Q9BWP8 271 aa9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 TSGA10Q9BZW7 698 aa9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 ELOVL4Q9GZR5 314 aa9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 ACP6Q9NPH0 428 aa9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 ARHGEF3Q9NR81 526 aa9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 TRMT1Q9NXH9 659 aaKnown RBP9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 DNAJB4Q9UDY4 337 aa9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 KIAA1257Q9ULG3 409 aa9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 NENFQ9UMX5 172 aa9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 SMG5Q9UPR3 1016 aaKnown RBP9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 PRG3Q9Y2Y8 225 aaPredicted RBP9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 REXO2Q9Y3B8 237 aaKnown RBP9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 CEP83Q9Y592 693 aa9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 PCDHA13Q9Y5I0 950 aa9.09□□□□□ -0.95
KLHDC4-220ENST00000568338 SF3B1O75533 1304 aaKnown RBP eCLIP9.08□□□□□ -0.966e-7■■■■■ 71.8
KLHDC4-220ENST00000568338 USP27XA6NNY8 438 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 GABRDO14764 452 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 NRP1O14786 923 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 LAMTOR5O43504 91 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 KRT86O43790 486 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 ZNF500O60304 480 aaPredicted RBP9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 RTN2O75298 545 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 TADA2AO75478 443 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 LSM8O95777 96 aaKnown RBP9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 ALDH2P05091 517 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 GZMAP12544 262 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 TYMPP19971 482 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 BRD2P25440 801 aaKnown RBP9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 PCSK1P29120 753 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 GNL1P36915 607 aaPredicted RBP9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 MAGEA1P43355 309 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 BRCC3P46736 316 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 SLC11A1P49279 550 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 ALDH7A1P49419 539 aaKnown RBP9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 KIF5AQ12840 1032 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 ELAVL2Q12926 359 aaKnown RBP9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 ORC1Q13415 861 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 ZNF528Q3MIS6 628 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 ARHGAP29Q52LW3 1261 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 CD300LGQ6UXG3 332 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 ZNF662Q6ZS27 426 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 VPS52Q8N1B4 723 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 SLC39A11Q8N1S5 342 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 PJA1Q8NG27 643 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 RSAD2Q8WXG1 361 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 HEXIM2Q96MH2 286 aaKnown RBP9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 TWNKQ96RR1 684 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 ZNF518BQ9C0D4 1074 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 SPATA6Q9NWH7 488 aaPredicted RBP9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 DLGAP2Q9P1A6 1054 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 GMEB2Q9UKD1 530 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 ADAM28Q9UKQ2 775 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 FBXO4Q9UKT5 387 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 ANGPTL2Q9UKU9 493 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 INTUQ9ULD6 942 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 PCDHGC3Q9UN70 934 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 FAN1Q9Y2M0 1017 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 PCDHGA2Q9Y5H1 932 aa9.08□□□□□ -0.96
KLHDC4-220ENST00000568338 FRYLO94915 3013 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 F8W810 466 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 O00370 1275 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 SYN3O14994 580 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 PJA2O43164 708 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 CALCAP01258 141 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 CYP1A1P04798 512 aaPredicted RBP9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 GALTP07902 379 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 H2AFZP0C0S5 128 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 NSFP46459 744 aaKnown RBP9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 BCAR1P56945 870 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 NOMO3P69849 1222 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 CENPCQ03188 943 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 PTPN14Q15678 1187 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 CNGA2Q16280 664 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 CLEC16AQ2KHT3 1053 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 NAA35Q5VZE5 725 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 OVOS1Q6IE37 1185 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 ACAD10Q6JQN1 1059 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 FUT10Q6P4F1 479 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 H2AFVQ71UI9 128 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 ACOT1Q86TX2 421 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 OSTM1Q86WC4 334 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 PALB2Q86YC2 1186 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 PASD1Q8IV76 773 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 REXO1L1PQ8IX06 675 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 CRYBG2Q8N1P7 616 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 THEM5Q8N1Q8 247 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 SLC44A3Q8N4M1 653 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 B3GALNT2Q8NCR0 500 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 TMEM35BQ8NCS4 154 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 NETO1Q8TDF5 533 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 GPR152Q8TDT2 470 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 SLC22A17Q8WUG5 538 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 AUTS2Q8WXX7 1259 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 CTNNBL1Q8WYA6 563 aaPredicted RBP9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 TFAP2BQ92481 460 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 NXPE3Q969Y0 559 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 TRIM11Q96F44 468 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 SHDQ96IW2 340 aa9.07□□□□□ -0.96
KLHDC4-220ENST00000568338 PCDHB18PQ96TA0 734 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms