RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 TMEM209Q96SK2 561 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 SMOQ99835 787 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 ACBD6Q9BR61 282 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 ERP44Q9BS26 406 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 FAM114A2Q9NRY5 505 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 ATP11BQ9Y2G3 1177 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 PTPRDP23468 1912 aa12.29□□□□□ -0.44
BBS4-213ENST00000567279 TMEM189-UBE2V1I3L0A0 370 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 TJP3O95049 919 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 FAM153BP0C7A2 387 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 KDELR1P24390 212 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 CACNA2D1P54289 1103 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 TSPY1Q01534 308 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 YWHAHQ04917 246 aaPredicted RBP12.28□□□□□ -0.44
BBS4-213ENST00000567279 ADCY2Q08462 1091 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 ADCY1Q08828 1119 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 PPP1R7Q15435 360 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 FAM153CQ494X1 144 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 EFHC1Q5JVL4 640 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 DUPD1Q68J44 220 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 KCTD6Q8NC69 237 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 NDRG1Q92597 394 aaKnown RBP12.28□□□□□ -0.44
BBS4-213ENST00000567279 CAVIN3Q969G5 261 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 CASD1Q96PB1 797 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 NEUROG2Q9H2A3 272 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.28□□□□□ -0.44
BBS4-213ENST00000567279 TMEM30AQ9NV96 361 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 TMLHEQ9NVH6 421 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 OGFRQ9NZT2 677 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 FAM153AQ9UHL3 310 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 PATJQ8NI35 1801 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 TTC3P53804 2025 aa12.28□□□□□ -0.44
BBS4-213ENST00000567279 C3orf70A6NLC5 250 aaPredicted RBP12.27□□□□□ -0.44
BBS4-213ENST00000567279 RRP9O43818 475 aaKnown RBP12.27□□□□□ -0.44
BBS4-213ENST00000567279 HSF2BPO75031 334 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 DAB1O75553 588 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 CXCL10P02778 98 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 CD48P09326 243 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 TFE3P19532 575 aaPredicted RBP12.27□□□□□ -0.44
BBS4-213ENST00000567279 ECHS1P30084 290 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 PTPN9P43378 593 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 NDUFV1P49821 464 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 TKTL1P51854 596 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 DYNLT1P63172 113 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 MRPS5P82675 430 aaKnown RBP12.27□□□□□ -0.44
BBS4-213ENST00000567279 KRT17Q04695 432 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 NNTQ13423 1086 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 FBXO46Q6PJ61 603 aaPredicted RBP12.27□□□□□ -0.44
BBS4-213ENST00000567279 GPRIN1Q7Z2K8 1008 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 NPAS4Q8IUM7 802 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 ZMIZ2Q8NF64 920 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 GRK7Q8WTQ7 553 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 SEC14L1Q92503 715 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 ZBTB9Q96C00 473 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 HAUS1Q96CS2 278 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 KCNK16Q96T55 309 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 ULBP1Q9BZM6 244 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 NRDE2Q9H7Z3 1164 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 HOMER3Q9NSC5 361 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 GPATCH2LQ9NWQ4 482 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.27□□□□□ -0.44
BBS4-213ENST00000567279 SNX24Q9Y343 169 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 CEP350Q5VT06 3117 aa12.27□□□□□ -0.44
BBS4-213ENST00000567279 FNDC1Q4ZHG4 1894 aaPredicted RBP12.27□□□□□ -0.44
BBS4-213ENST00000567279 VWA8A3KMH1 1905 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.27□□□□□ -0.45
BBS4-213ENST00000567279 HOXA2O43364 376 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 TADA2AO75478 443 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 BDNFP23560 247 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 SULT1E1P49888 294 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 CDH6P55285 790 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 KRT81Q14533 505 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 CCNG2Q16589 344 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 FAM171BQ6P995 826 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 CYP4V2Q6ZWL3 525 aaPredicted RBP12.27□□□□□ -0.45
BBS4-213ENST00000567279 RFX6Q8HWS3 928 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 DEFB106AQ8N104 65 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 EIF1ADQ8N9N8 165 aaKnown RBP12.27□□□□□ -0.45
BBS4-213ENST00000567279 TOX2Q96NM4 488 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 PKMYT1Q99640 499 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 DDX23Q9BUQ8 820 aaKnown RBP12.27□□□□□ -0.45
BBS4-213ENST00000567279 CALN1Q9BXU9 219 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 ACBD3Q9H3P7 528 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 FAM53CQ9NYF3 392 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 HCSTQ9UBK5 93 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 HPCAL4Q9UM19 191 aa12.27□□□□□ -0.45
BBS4-213ENST00000567279 TBKBP1A7MCY6 615 aa12.26□□□□□ -0.45
BBS4-213ENST00000567279 NRP1O14786 923 aa12.26□□□□□ -0.45
BBS4-213ENST00000567279 TRAPPC3O43617 180 aa12.26□□□□□ -0.45
BBS4-213ENST00000567279 FBXO21O94952 628 aa12.26□□□□□ -0.45
BBS4-213ENST00000567279 PARNO95453 639 aaKnown RBP12.26□□□□□ -0.45
BBS4-213ENST00000567279 GAS8O95995 478 aa12.26□□□□□ -0.45
BBS4-213ENST00000567279 HDAC4P56524 1084 aa12.26□□□□□ -0.45
BBS4-213ENST00000567279 MAPRE1Q15691 268 aaKnown RBP12.26□□□□□ -0.45
BBS4-213ENST00000567279 ARCQ7LC44 396 aa12.26□□□□□ -0.45
BBS4-213ENST00000567279 LRRTM3Q86VH5 581 aa12.26□□□□□ -0.45
BBS4-213ENST00000567279 SPATA2LQ8IUW3 424 aaPredicted RBP12.26□□□□□ -0.45
BBS4-213ENST00000567279 KRT222Q8N1A0 295 aa12.26□□□□□ -0.45
BBS4-213ENST00000567279 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.26□□□□□ -0.45
BBS4-213ENST00000567279 SLCO2A1Q92959 643 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms