RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 FRMD3A2A2Y4 597 aa16.5■□□□□ 0.23
PALB2-205ENST00000567003 CLDN5O00501 218 aa16.5■□□□□ 0.23
PALB2-205ENST00000567003 TRIM66O15016 1216 aa16.5■□□□□ 0.23
PALB2-205ENST00000567003 CFIP05156 583 aa16.5■□□□□ 0.23
PALB2-205ENST00000567003 CEBPZQ03701 1054 aaKnown RBP16.5■□□□□ 0.23
PALB2-205ENST00000567003 LMAN2Q12907 356 aa16.5■□□□□ 0.23
PALB2-205ENST00000567003 EOGTQ5NDL2 527 aa16.5■□□□□ 0.23
PALB2-205ENST00000567003 LY6G5CQ5SRR4 150 aa16.5■□□□□ 0.23
PALB2-205ENST00000567003 DPH6Q7L8W6 267 aa16.5■□□□□ 0.23
PALB2-205ENST00000567003 PHTF2Q8N3S3 785 aa16.5■□□□□ 0.23
PALB2-205ENST00000567003 WBP2Q969T9 261 aa16.5■□□□□ 0.23
PALB2-205ENST00000567003 GTPBP2Q9BX10 602 aaKnown RBP16.5■□□□□ 0.23
PALB2-205ENST00000567003 POLMQ9NP87 494 aaPredicted RBP16.5■□□□□ 0.23
PALB2-205ENST00000567003 PCDH15Q96QU1 1955 aa16.49■□□□□ 0.23
PALB2-205ENST00000567003 TMEM8BA6NDV4 472 aa16.49■□□□□ 0.23
PALB2-205ENST00000567003 TRIM24O15164 1050 aa16.49■□□□□ 0.23
PALB2-205ENST00000567003 ADH1CP00326 375 aa16.49■□□□□ 0.23
PALB2-205ENST00000567003 PFKLP17858 780 aa16.49■□□□□ 0.23
PALB2-205ENST00000567003 GRIA2P42262 883 aa16.49■□□□□ 0.23
PALB2-205ENST00000567003 WASP42768 502 aa16.49■□□□□ 0.23
PALB2-205ENST00000567003 FAM193AP78312 1265 aa16.49■□□□□ 0.23
PALB2-205ENST00000567003 NOP14P78316 857 aaKnown RBP16.49■□□□□ 0.23
PALB2-205ENST00000567003 SIM1P81133 766 aaPredicted RBP16.49■□□□□ 0.23
PALB2-205ENST00000567003 MAPRE1Q15691 268 aaKnown RBP16.49■□□□□ 0.23
PALB2-205ENST00000567003 PIP4P1Q86T03 277 aa16.49■□□□□ 0.23
PALB2-205ENST00000567003 OR6B3Q8NGW1 331 aa16.49■□□□□ 0.23
PALB2-205ENST00000567003 C8orf48Q96LL4 319 aa16.49■□□□□ 0.23
PALB2-205ENST00000567003 SNX25Q9H3E2 840 aa16.49■□□□□ 0.23
PALB2-205ENST00000567003 RTN4Q9NQC3 1192 aaKnown RBP16.49■□□□□ 0.23
PALB2-205ENST00000567003 PILRBQ9UKJ0 227 aa16.49■□□□□ 0.23
PALB2-205ENST00000567003 SRPRBQ9Y5M8 271 aaKnown RBP16.49■□□□□ 0.23
PALB2-205ENST00000567003 ZNF233A6NK53 670 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 SLC9A3R1O14745 358 aaPredicted RBP16.48■□□□□ 0.23
PALB2-205ENST00000567003 CST3P01034 146 aaPredicted RBP16.48■□□□□ 0.23
PALB2-205ENST00000567003 IRF1P10914 325 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 HOXD13P35453 343 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 GNL1P36915 607 aaPredicted RBP16.48■□□□□ 0.23
PALB2-205ENST00000567003 STAT6P42226 847 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 ALCAMQ13740 583 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 DUOXA2Q1HG44 320 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 TDRD10Q5VZ19 366 aaKnown RBP16.48■□□□□ 0.23
PALB2-205ENST00000567003 SLC23A3Q6PIS1 610 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 TRAPPC11Q7Z392 1133 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 MIB1Q86YT6 1006 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 ZFRQ96KR1 1074 aaKnown RBP16.48■□□□□ 0.23
PALB2-205ENST00000567003 B3GNT5Q9BYG0 378 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 SLC32A1Q9H598 525 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 HSPBP1Q9NZL4 362 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 HCN2Q9UL51 889 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 NEUROG3Q9Y4Z2 214 aa16.48■□□□□ 0.23
PALB2-205ENST00000567003 COCHO43405 550 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 DLATP10515 647 aaKnown RBP16.47■□□□□ 0.23
PALB2-205ENST00000567003 PTPN1P18031 435 aaKnown RBP16.47■□□□□ 0.23
PALB2-205ENST00000567003 GABRG2P18507 467 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 TXLNAP40222 546 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 EIF2DP41214 584 aaKnown RBP16.47■□□□□ 0.23
PALB2-205ENST00000567003 TNFRSF4P43489 277 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 RPL6Q02878 288 aaKnown RBP16.47■□□□□ 0.23
PALB2-205ENST00000567003 RING1Q06587 406 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 SEMA3BQ13214 749 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 PEAR1Q5VY43 1037 aaPredicted RBP16.47■□□□□ 0.23
PALB2-205ENST00000567003 BBS7Q8IWZ6 715 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 RDH13Q8NBN7 331 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 FBXO32Q969P5 355 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 ELMO3Q96BJ8 720 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 CEP295NLQ96MC4 621 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 SLITRK1Q96PX8 696 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 EHD2Q9NZN4 543 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 CALCOCO1Q9P1Z2 691 aa16.47■□□□□ 0.23
PALB2-205ENST00000567003 A0A0A0MRY4 1105 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 TBC1D3BA6NDS4 549 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.46■□□□□ 0.23
PALB2-205ENST00000567003 TULP3O75386 442 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 YWHAQP27348 245 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 PPP3CCP48454 512 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 ATXN3P54252 364 aaPredicted RBP16.46■□□□□ 0.23
PALB2-205ENST00000567003 HSF5Q4G112 596 aaPredicted RBP16.46■□□□□ 0.23
PALB2-205ENST00000567003 C10orf76Q5T2E6 689 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 CCDC73Q6ZRK6 1079 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 TMEM25Q86YD3 366 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 WDR49Q8IV35 697 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 ETFBKMTQ8IXQ9 262 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 CHCHD4Q8N4Q1 142 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 PDILTQ8N807 584 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 ZNF513Q8N8E2 541 aaPredicted RBP16.46■□□□□ 0.23
PALB2-205ENST00000567003 SCAMP5Q8TAC9 235 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 CCDC127Q96BQ5 260 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 ELOVL4Q9GZR5 314 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 CCSER2Q9H7U1 834 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 CD93Q9NPY3 652 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 CHORDC1Q9UHD1 332 aaPredicted RBP16.46■□□□□ 0.23
PALB2-205ENST00000567003 LHX6Q9UPM6 363 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 MSRB2Q9Y3D2 182 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.46■□□□□ 0.23
PALB2-205ENST00000567003 CELSR3Q9NYQ7 3312 aa16.46■□□□□ 0.23
PALB2-205ENST00000567003 SMG1Q96Q15 3661 aaKnown RBP16.46■□□□□ 0.22
PALB2-205ENST00000567003 LOC400499M0QZD8 3231 aa16.45■□□□□ 0.22
PALB2-205ENST00000567003 E2F8A0AVK6 867 aa16.45■□□□□ 0.22
PALB2-205ENST00000567003 TACC1O75410 805 aa16.45■□□□□ 0.22
PALB2-205ENST00000567003 HOXB2P14652 356 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms