RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 ACSL1P33121 698 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 TUFMP49411 452 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 AP3M2P53677 418 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 ARPC4P59998 168 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SNAPC2Q13487 334 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 KARSQ15046 597 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 SPRED3Q2MJR0 410 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 GLE1Q53GS7 698 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 ARHGAP15Q53QZ3 475 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 ARSJQ5FYB0 599 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 KRBOX4Q5JUW0 171 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 TTC19Q6DKK2 380 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 NANOGNBQ7Z5D8 188 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SULF2Q8IWU5 870 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 DIS3L2Q8IYB7 885 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 ADGRG2Q8IZP9 1017 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 CACNA2D3Q8IZS8 1091 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SUPT20HQ8NEM7 779 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 CDC26Q8NHZ8 85 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 RABGGTAQ92696 567 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 CNKSR1Q969H4 720 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 GFM2Q969S9 779 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 C1GALT1C1Q96EU7 318 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 FEM1CQ96JP0 617 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 HSH2DQ96JZ2 352 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 DACH2Q96NX9 599 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 RPRD1AQ96P16 312 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 KCTD15Q96SI1 283 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 CGRRF1Q99675 332 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 ZKSCAN3Q9BRR0 538 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 NTPCRQ9BSD7 190 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 GRIP2Q9C0E4 1043 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 PCIF1Q9H4Z3 704 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SP110Q9HB58 689 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 PDE11AQ9HCR9 933 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 PCDHB16Q9NRJ7 776 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 DDX28Q9NUL7 540 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 ABT1Q9ULW3 272 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 CHKBQ9Y259 395 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 ATP23Q9Y6H3 246 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 ERICH2A1L162 156 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 DENND3A2RUS2 1198 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 VWA5AO00534 786 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 NRG2O14511 850 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 KCNK3O14649 394 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 DDNO94850 711 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 NDST3O95803 873 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 CAVIN2O95810 425 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 FTLP02792 175 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 LTA4HP09960 611 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 XRCC6P12956 609 aaKnown RBP eCLIP3.23□□□□□ -1.89
CHD9-216ENST00000565803 RPS2P15880 293 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 SLC9A1P19634 815 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 MAPK4P31152 587 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SOX6P35712 828 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 PITPNBP48739 271 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 GALK2Q01415 458 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 PRKCEQ02156 737 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 RNASELQ05823 741 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 ZMYND11Q15326 602 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 NFIL3Q16649 462 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 RTN1Q16799 776 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 CEP78Q5JTW2 689 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 NOL9Q5SY16 702 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 ZNF362Q5T0B9 420 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 ATXN7L2Q5T6C5 722 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 ANKRD40Q6AI12 368 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 TAOK1Q7L7X3 1001 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 KRT74Q7RTS7 529 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 CACNA2D4Q7Z3S7 1137 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SZRD1Q7Z422 152 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 RALYLQ86SE5 291 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 MOGAT3Q86VF5 341 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 FRMD1Q8N878 549 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 BANPQ8N9N5 519 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SH3RF3Q8TEJ3 882 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 KIAA1143Q96AT1 154 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 TMEM41AQ96HV5 264 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 CCDC74BQ96LY2 380 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 THUMPD2Q9BTF0 503 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 ANO3Q9BYT9 981 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SLC25A18Q9H1K4 315 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 STN1Q9H668 368 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 BICC1Q9H694 974 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 TTC12Q9H892 705 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 CNTD2Q9H8S5 307 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 PDE7BQ9NP56 450 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 TMPRSS4Q9NRS4 437 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 TMOD2Q9NZR1 351 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 APEX2Q9UBZ4 518 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 KMT2BQ9UMN6 2715 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 STX8Q9UNK0 236 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 PCDHB12Q9Y5F1 795 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 A0A1W2PQ09 198 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 PROB1E7EW31 1015 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 ERVH48-1M5A8F1 160 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 C2CD2LO14523 706 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 ATP2A1O14983 1001 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 PGRMC2O15173 223 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 TBX1O43435 398 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms