RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 MAOBP27338 520 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 MATR3P43243 847 aaKnown RBP eCLIP11.95□□□□□ -0.5
CAPN3-215ENST00000565559 NPTX2P47972 431 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 PEX3P56589 373 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 STRN3Q13033 797 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 GAB4Q2WGN9 574 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 MSS51Q4VC12 460 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 SEZ6Q53EL9 994 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 SDE2Q6IQ49 451 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 DHRS13Q6UX07 377 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 SFTPA1Q8IWL2 248 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 ZCCHC9Q8N567 271 aaKnown RBP11.95□□□□□ -0.5
CAPN3-215ENST00000565559 ZNF513Q8N8E2 541 aaPredicted RBP11.95□□□□□ -0.5
CAPN3-215ENST00000565559 KIAA1958Q8N8K9 716 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 FBXO18Q8NFZ0 1043 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 TRMT2BQ96GJ1 504 aaKnown RBP11.95□□□□□ -0.5
CAPN3-215ENST00000565559 C8orf76Q96K31 380 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 MIR1-1HGQ9H1L0 117 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 POLD4Q9HCU8 107 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 KMT5AQ9NQR1 393 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 FNDC3AQ9Y2H6 1198 aaKnown RBP11.95□□□□□ -0.5
CAPN3-215ENST00000565559 RBM19Q9Y4C8 960 aaKnown RBP11.95□□□□□ -0.5
CAPN3-215ENST00000565559 COL6A6A6NMZ7 2263 aa11.95□□□□□ -0.5
CAPN3-215ENST00000565559 K7ELQ4 463 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-215ENST00000565559 ABLIM1O14639 778 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 TADA3O75528 432 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 NOL4O94818 638 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 NFICP08651 508 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 CLTAP09496 248 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 JUPP14923 745 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 KRT2P35908 639 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 CSRP3P50461 194 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 DHCR24Q15392 516 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 SAFBQ15424 915 aaKnown RBP eCLIP11.94□□□□□ -0.5
CAPN3-215ENST00000565559 NFE2Q16621 373 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-215ENST00000565559 HLA-BQ31612 363 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 INAVAQ3KP66 663 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 ZC2HC1CQ53FD0 456 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-215ENST00000565559 DBX2Q6ZNG2 339 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 FILIP1Q7Z7B0 1213 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 RETREG3Q86VR2 466 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 TMEM130Q8N3G9 435 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 STKLD1Q8NE28 680 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 SNIP1Q8TAD8 396 aaKnown RBP11.94□□□□□ -0.5
CAPN3-215ENST00000565559 INTS4Q96HW7 963 aaKnown RBP11.94□□□□□ -0.5
CAPN3-215ENST00000565559 MYRFLQ96LU7 910 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 TSPAN18Q96SJ8 248 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 ARHGAP28Q9P2N2 729 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.94□□□□□ -0.5
CAPN3-215ENST00000565559 SMC3Q9UQE7 1217 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 NFE2L3Q9Y4A8 694 aa11.94□□□□□ -0.5
CAPN3-215ENST00000565559 ZNF638Q14966 1978 aaKnown RBP11.93□□□□□ -0.5
CAPN3-215ENST00000565559 TTC26A0AVF1 554 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 BTBD18B2RXH4 712 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 LEFTY2O00292 366 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 CLDN3O15551 220 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 ADH5P11766 374 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 GRK6P43250 576 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 GPR15P49685 360 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 GUCY2FP51841 1108 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 ATP2C1P98194 919 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-215ENST00000565559 TSPY1Q01534 308 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 TLE3Q04726 772 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 ZBTB6Q15916 424 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 QPCTQ16769 361 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 KYAT1Q16773 422 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 SDHAF4Q5VUM1 108 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 LRRTM3Q86VH5 581 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 FMNL3Q8IVF7 1028 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 DIS3L2Q8IYB7 885 aaKnown RBP11.93□□□□□ -0.5
CAPN3-215ENST00000565559 ADGRG2Q8IZP9 1017 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 FGF11Q92914 225 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 TNFRSF25Q93038 417 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 ZBTB45Q96K62 511 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-215ENST00000565559 BHMT2Q9H2M3 363 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 RPF1Q9H9Y2 349 aaKnown RBP11.93□□□□□ -0.5
CAPN3-215ENST00000565559 GCNT4Q9P109 453 aa11.93□□□□□ -0.5
CAPN3-215ENST00000565559 MUC22E2RYF6 1773 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-215ENST00000565559 C2orf78A6NCI8 922 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 CYB561D2O14569 222 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 PPEF2O14830 753 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 BCAT2O15382 392 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-215ENST00000565559 CDK4P11802 303 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 PFKLP17858 780 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 RPA1P27694 616 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 GJB2P29033 226 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 CD6P30203 668 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 NTSR1P30989 418 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 ACTN2P35609 894 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 MESP2Q0VG99 397 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 NR5A1Q13285 461 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 DDR2Q16832 855 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 PTPRNQ16849 979 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 EARS2Q5JPH6 523 aaKnown RBP11.92□□□□□ -0.5
CAPN3-215ENST00000565559 C10orf76Q5T2E6 689 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 BROXQ5VW32 411 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 BTBD8Q5XKL5 378 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 HAUS3Q68CZ6 603 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 TAS1R3Q7RTX0 852 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 C12orf40Q86WS4 652 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 332.7 ms