RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 BMPR1AP36894 532 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 PBX3P40426 434 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 PIGHQ14442 188 aaPredicted RBP20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 WHAMMP3Q1A5X7 153 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 CFAP221Q4G0U5 840 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 LLGL2Q6P1M3 1020 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 FAM183BPQ6ZVS7 135 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 ARCQ7LC44 396 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 ALYREFQ86V81 257 aaKnown RBP20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 GPR65Q8IYL9 337 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 C2orf15Q8WU43 125 aaKnown RBP20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 BCL7CQ8WUZ0 217 aaPredicted RBP20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 HES6Q96HZ4 224 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 MCEEQ96PE7 176 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 SMOQ99835 787 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 HERC2P3Q9BVR0 1158 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 LRRC4Q9HBW1 653 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 DMAP1Q9NPF5 467 aaPredicted RBP20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 CHST7Q9NS84 486 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 TJP2Q9UDY2 1190 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 RWDD3Q9Y3V2 267 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 PCDHB12Q9Y5F1 795 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 BACE2Q9Y5Z0 518 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 KIAA1671Q9BY89 1806 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 MUC6Q6W4X9 2439 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 PAPSS1O43252 624 aaPredicted RBP20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 FBXO21O94952 628 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 CSPG5O95196 566 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 COMTP21964 271 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 MAP3K7CLP57077 242 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 RPL7AP62424 266 aaKnown RBP20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 ZP2Q05996 745 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 ACAP1Q15027 740 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 CLUL1Q15846 466 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 CCDC142Q17RM4 750 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 RTP2Q5QGT7 225 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 FAM102AQ5T9C2 384 aaPredicted RBP20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 OLFML1Q6UWY5 402 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 VSTM1Q6UX27 236 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 DDX53Q86TM3 631 aaKnown RBP20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 UBL4BQ8N7F7 174 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 NIPA2Q8N8Q9 360 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 PIK3R5Q8WYR1 880 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 PBKQ96KB5 322 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 TMEM209Q96SK2 561 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 OSBPL9Q96SU4 736 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 LMAN2LQ9H0V9 348 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 TMLHEQ9NVH6 421 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 RNF14Q9UBS8 474 aa20.04■□□□□ 0.8
CSPG4P13-201ENST00000565545 CCDC66A2RUB6 948 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 TMEM110-MUSTN1A8MSY1 372 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 GRM6O15303 877 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 SART1O43290 800 aaKnown RBP20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 SPOPO43791 374 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 BDNFP23560 247 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 CTNNA2P26232 953 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 MAGEA11P43364 429 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 GPR17Q13304 367 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 COL19A1Q14993 1142 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 SLC39A12Q504Y0 691 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 RAB41Q5JT25 222 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 EFHC1Q5JVL4 640 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 ADHFE1Q8IWW8 467 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 BTBD6Q96KE9 485 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 GOLPH3Q9H4A6 298 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 IGFLR1Q9H665 355 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 METTL5Q9NRN9 209 aaKnown RBP20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 ASNSD1Q9NWL6 643 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 MTRRQ9UBK8 725 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 TMEM59LQ9UK28 342 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 PCDHB5Q9Y5E4 795 aa20.03■□□□□ 0.8
CSPG4P13-201ENST00000565545 PATJQ8NI35 1801 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 C5orf67F2Z3F1 127 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 GABBR2O75899 941 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 BEST1O76090 585 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 GLI1P08151 1106 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 LCP1P13796 627 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 DESP17661 470 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 RFC1P35251 1148 aaPredicted RBP20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 DSG1Q02413 1049 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 KIAA1841Q6NSI8 718 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 SLC26A9Q7LBE3 791 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 TAS1R1Q7RTX1 841 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 SCUBE3Q8IX30 993 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 SIX6OS1Q8N1H7 587 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 SCML4Q8N228 414 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 ZMIZ2Q8NF64 920 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 SPPL2BQ8TCT7 592 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 CLP1Q92989 425 aaKnown RBP20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 CD101Q93033 1021 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 NCAPGQ9BPX3 1015 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 CNGB3Q9NQW8 809 aa20.02■□□□□ 0.8
CSPG4P13-201ENST00000565545 PIEZO1Q92508 2521 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 HHLA1C9JL84 531 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 TRIM66O15016 1216 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 GJB6O95452 261 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 CTNNA1P35221 906 aaKnown RBP20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 LTBRP36941 435 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 GLUD2P49448 558 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 KRT17Q04695 432 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms