RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 CNTN3Q9P232 1028 aa7.57□□□□□ -1.2
SMG1-210ENST00000565224 STOML1Q9UBI4 398 aa7.57□□□□□ -1.2
SMG1-210ENST00000565224 M0QYV0 167 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 ACKR2O00590 384 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 COPEO14579 308 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 KLF11O14901 512 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 GYG2O15488 501 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 GSC2O15499 205 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 ENDOD1O94919 500 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 IL18RAPO95256 599 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 DLDP09622 509 aaKnown RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 ACADSP16219 412 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 GABRB2P47870 512 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 ZNF143P52747 638 aaPredicted RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 CDH6P55285 790 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 CDH8P55286 799 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 CBLBQ13191 982 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 ORC1Q13415 861 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 TFDP2Q14188 446 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 KHDC1Q4VXA5 237 aaKnown RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 FAM102AQ5T9C2 384 aaPredicted RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 TTC39BQ5VTQ0 682 aaPredicted RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 CCDC62Q6P9F0 684 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 METTL7BQ6UX53 244 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 NPNTQ6UXI9 565 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 SLC26A11Q86WA9 606 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 EXOC8Q8IYI6 725 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 LRRC71Q8N4P6 559 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.56□□□□□ -1.2
SMG1-210ENST00000565224 CFAP36Q96G28 342 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 TWNKQ96RR1 684 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 PEBP4Q96S96 227 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 OSBPL1AQ9BXW6 950 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 FRMD8Q9BZ67 464 aaPredicted RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 IQCGQ9H095 443 aaKnown RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 SDCBP2Q9H190 292 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 SMYD3Q9H7B4 428 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 FBXO6Q9NRD1 293 aaPredicted RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.56□□□□□ -1.2
SMG1-210ENST00000565224 ZFATQ9P243 1243 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 PAK5Q9P286 719 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 SIX4Q9UIU6 781 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 FZD1Q9UP38 647 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 AFG3L2Q9Y4W6 797 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 IGKV6-21A0A0C4DH24 114 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 H7C0C1 242 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 CILPO75339 1184 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 SKAP2O75563 359 aaPredicted RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 CXCL8P10145 99 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 GPD1P21695 349 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 EDNRBP24530 442 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 ATP5OP48047 213 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 GMPSP49915 693 aaPredicted RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 YWHAZP63104 245 aaKnown RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 MMRN1Q13201 1228 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 TMEM132AQ24JP5 1023 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 FAM91A1Q658Y4 838 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 DSTYKQ6XUX3 929 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 VPS52Q8N1B4 723 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 CEP120Q8N960 986 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 C1orf127Q8N9H9 656 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 DNAJC9Q8WXX5 260 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 MCUR1Q96AQ8 359 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 PRR11Q96HE9 360 aaPredicted RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 OXNAD1Q96HP4 312 aaPredicted RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 TMEM176AQ96HP8 235 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 SRPK1Q96SB4 655 aaKnown RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 CNPY3Q9BT09 278 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 ELOVL4Q9GZR5 314 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 MMADHCQ9H3L0 296 aaPredicted RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 FZD8Q9H461 694 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 RPF1Q9H9Y2 349 aaKnown RBP7.56□□□□□ -1.2
SMG1-210ENST00000565224 RAB6BQ9NRW1 208 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 HMGXB4Q9UGU5 601 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 ZNF180Q9UJW8 692 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.56□□□□□ -1.2
SMG1-210ENST00000565224 TTLL3Q9Y4R7 772 aa7.56□□□□□ -1.2
SMG1-210ENST00000565224 A6NHS1 94 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 TRIM49D1C9J1S8 452 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 I3L4J1 428 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 INO80B-WBP1J3KQ70 363 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 FCHO1O14526 889 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 B4GALT5O43286 388 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 AVILO75366 819 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 FAM155BO75949 473 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 KRT37O76014 449 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 C1QAP02745 245 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 HMGCRP04035 888 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 NFICP08651 508 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 SNRPAP09012 282 aaKnown RBP7.55□□□□□ -1.2
SMG1-210ENST00000565224 TGFB3P10600 412 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 MYL2P10916 166 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 ESRRAP11474 423 aaPredicted RBP7.55□□□□□ -1.2
SMG1-210ENST00000565224 GCKP35557 465 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 VHLP40337 213 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 GPD2P43304 727 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 KRT81Q14533 505 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 CCDC6Q16204 474 aa7.55□□□□□ -1.2
SMG1-210ENST00000565224 MUM1Q2TAK8 710 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms