RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CHUKO15111 745 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 TSPAN3O60637 253 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 PEX14O75381 377 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 VNN1O95497 513 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 NFICP08651 508 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 HDCP19113 662 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 HUNKP57058 714 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 RPL19P84098 196 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 MTFR1Q15390 333 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 TSC22D1Q15714 1073 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CCL15Q16663 113 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 DCAF6Q58WW2 860 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 TTC27Q6P3X3 843 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 PRR23CQ6ZRP0 262 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 RIPOR1Q6ZS17 1223 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CEP57Q86XR8 500 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ZDHHC17Q8IUH5 632 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ANKRD42Q8N9B4 389 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 C15orf40Q8WUR7 153 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ASB2Q96Q27 587 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 DNAJC7Q99615 494 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CASP8AP2Q9UKL3 1982 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 LOC285556D6RIA3 1793 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ENDOD1O94919 500 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SLC4A1P02730 911 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 DSG3P32926 999 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 TAS2R40P59535 323 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 COG7P83436 770 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 JADE1Q6IE81 842 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CES3Q6UWW8 571 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CRELD2Q6UXH1 353 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 SNX31Q8N9S9 440 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 HEXDCQ8WVB3 486 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 GMCL1Q96IK5 515 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SMYD3Q9H7B4 428 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ZDHHC4Q9NPG8 344 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ANAPC7Q9UJX3 599 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 PCDHB4Q9Y5E5 795 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 COL11A1P12107 1806 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 RPTORQ8N122 1335 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 P4HBP07237 508 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 NR2C1P13056 603 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CES1P23141 567 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ZBTB16Q05516 673 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 C16orf46Q6P387 395 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SPRED2Q7Z698 418 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 RNF135Q8IUD6 432 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 DHTKD1Q96HY7 919 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 RBM41Q96IZ5 413 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 OLFM3Q96PB7 478 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SLC39A3Q9BRY0 314 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SHCBP1LQ9BZQ2 653 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SDCBP2Q9H190 292 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 UPF3AQ9H1J1 476 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 VIPAS39Q9H9C1 493 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 UBN1Q9NPG3 1134 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 HEY1Q9Y5J3 304 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 DNAJC6O75061 913 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 BEST1O76090 585 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SYF2O95926 243 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 C6orf222P0C671 652 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 LCP1P13796 627 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 INSRRP14616 1297 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 UQCRBP14927 111 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 KCNA2P16389 499 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 PGFP49763 221 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ATXN3P54252 364 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 RAB15P59190 212 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 EPS8Q12929 822 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 NME3Q13232 169 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 BFSP2Q13515 415 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 EMBQ6PCB8 327 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 MYO1HQ8N1T3 1032 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 FAM76AQ8TAV0 307 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CABS1Q96KC9 395 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 FAM20AQ96MK3 541 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 TMEM209Q96SK2 561 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ZSWIM1Q9BR11 485 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 MSTO1Q9BUK6 570 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 C1QTNF7Q9BXJ2 289 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SPATC1LQ9H0A9 340 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 RBAKQ9NYW8 714 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 TBX20Q9UMR3 447 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 EFCAB8A8MWE9 144 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 WDR64B1ANS9 1081 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 F8VZ95 297 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 KRIT1O00522 736 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 GH1P01241 217 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SREBF2Q12772 1141 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 MXD4Q14582 209 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 PPP6R3Q5H9R7 873 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 PEX26Q7Z412 305 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 DAGLBQ8NCG7 672 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 JOSD2Q8TAC2 188 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 EPS8L3Q8TE67 593 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 SENP7Q9BQF6 1050 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CARD9Q9H257 536 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SPON1Q9HCB6 807 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SCHIP1Q9P0W5 487 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms