RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 BARX2Q9UMQ3 279 aaPredicted RBP7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 NRCAMQ92823 1304 aa7.62□□□□□ -1.19
HERPUD1-209ENST00000564678 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 SMIM35A0A1B0GVV1 85 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 F8VP50 259 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 VTNP04004 478 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 AXLP30530 894 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 ADCY8P40145 1251 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 MAGOHP61326 146 aaKnown RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 ZNF252P-AS1Q0IIN9 211 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 MYO1EQ12965 1108 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 SIM2Q14190 667 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 PTPN20Q4JDL3 420 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 TM4SF20Q53R12 229 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 TNFAIP8L3Q5GJ75 292 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 MFSD5Q6N075 450 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 SPOCD1Q6ZMY3 1216 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 OR6J1Q8NGC5 347 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 IPO4Q8TEX9 1081 aaKnown RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 CHAC2Q8WUX2 184 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 CCDC74AQ96AQ1 378 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 MCRS1Q96EZ8 462 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 HPDLQ96IR7 371 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 CCDC114Q96M63 670 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 HERPUD2Q9BSE4 406 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 GCOM2Q9BZD3 368 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 DPP3Q9NY33 737 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 RSPH14Q9UHP6 348 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 ANAPC5Q9UJX4 755 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 GGA2Q9UJY4 613 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 AGAP1Q9UPQ3 857 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 R3HDM2Q9Y2K5 976 aaKnown RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 CITO14578 2027 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 hCG_1818297A0A087WSY0 165 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 O00370 1275 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 NDUFAB1O14561 156 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 RASGRF2O14827 1237 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 RGS16O15492 202 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 MEFVO15553 781 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 LIASO43766 372 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 CPNE3O75131 537 aaKnown RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 TCEA3O75764 348 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 TTC4O95801 387 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 KRT1P04264 644 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 ZNF286BP0CG31 522 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 PSMA2P25787 234 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 KLRC2P26717 231 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 ATP5DP30049 168 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 HPDP32754 393 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 RFC1P35251 1148 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 GPD2P43304 727 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 ITGA8P53708 1063 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 GDF10P55107 478 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 CDH8P55286 799 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 PSMC1P62191 440 aaKnown RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 GUCY1A3Q02108 690 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 OGDHQ02218 1023 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 CBX2Q14781 532 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 PTGISQ16647 500 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 GRAMD1BQ3KR37 738 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 SH3PXD2AQ5TCZ1 1133 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 MAP1SQ66K74 1059 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 DENND1BQ6P3S1 775 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 MFSD7Q6UXD7 560 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 XYLT1Q86Y38 959 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 CHPFQ8IZ52 775 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 ARMC2Q8NEN0 867 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 ATG4AQ8WYN0 398 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 NKD2Q969F2 451 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 ZBTB10Q96DT7 871 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 CPB2Q96IY4 423 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 SERPINB12Q96P63 405 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 SDCBP2Q9H190 292 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 AAASQ9NRG9 546 aa7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 FOXD3Q9UJU5 478 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-209ENST00000564678 CSDE1O75534 798 aaKnown RBP7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 RNF8O76064 485 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 MICAL2O94851 1124 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 GJB6O95452 261 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 FAM107AO95990 144 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 SHBGP04278 402 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 ITGAVP06756 1048 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 CDKN2BP42772 138 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 SNX16P57768 344 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 LLGL1Q15334 1064 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 GPR162Q16538 588 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 TAZQ16635 292 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 ATP13A4Q4VNC1 1196 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 DAB2IPQ5VWQ8 1189 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 SLC27A1Q6PCB7 646 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 LCLAT1Q6UWP7 414 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 TAOK1Q7L7X3 1001 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 SRLQ86TD4 932 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 GPR152Q8TDT2 470 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 HEXIM2Q96MH2 286 aaKnown RBP7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 NCAPGQ9BPX3 1015 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 NT5C1AQ9BXI3 368 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 ELOVL4Q9GZR5 314 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 ADAMTS10Q9H324 1103 aa7.6□□□□□ -1.19
HERPUD1-209ENST00000564678 CDC42EP4Q9H3Q1 356 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms