RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 ZMYND8Q9ULU4 1186 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 USP18Q9UMW8 372 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 C2CD2Q9Y426 696 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 CSADQ9Y600 493 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 ZNF646O15015 1829 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-249ENST00000564606 COL1A2P08123 1366 aa7.96□□□□□ -1.14
ATXN3-249ENST00000564606 TCRBV5S1A1TA0A578 114 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 BCLAF3A2AJT9 711 aaKnown RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 F8VP50 259 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 MDM4O15151 490 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 SPTLC1O15269 473 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 TP73O15350 636 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 MSCO60682 206 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 MAGEC1O60732 1142 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 H2AFYO75367 372 aaKnown RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 LGR5O75473 907 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 FARP2O94887 1054 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 KLHL2O95198 593 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 TRUB2O95900 331 aaKnown RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 ZBED1O96006 694 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 KRT19P08727 400 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 FAM163BP0C2L3 166 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 HARSP12081 509 aaKnown RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 TPSB2P20231 275 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 EDNRBP24530 442 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 GRK2P25098 689 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 BRD2P25440 801 aaKnown RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 SDC4P31431 198 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 VHLP40337 213 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 BAG6P46379 1132 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 HMGCS2P54868 508 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 BCAR1P56945 870 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 WDR4P57081 412 aaKnown RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 YWHAGP61981 247 aaKnown RBP eCLIP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 IRX1P78414 480 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 SP4Q02446 784 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 GUCA2AQ02747 115 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 PDE4CQ08493 712 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 LAMTOR4Q0VGL1 99 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 TTLL4Q14679 1199 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 TMEM132BQ14DG7 1078 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 TPSAB1Q15661 275 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 PKN2Q16513 984 aaKnown RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 GSTA3Q16772 222 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 MUM1Q2TAK8 710 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 DCAF4L1Q3SXM0 396 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 ANGEL2Q5VTE6 544 aaKnown RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 LBX2Q6XYB7 198 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 KYAT3Q6YP21 454 aaKnown RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 SEPT14Q6ZU15 432 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 FAM47EQ6ZV65 393 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 LONP2Q86WA8 852 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 UNC93AQ86WB7 457 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 ECHDC2Q86YB7 292 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 TMPRSS6Q8IU80 811 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 BANPQ8N9N5 519 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 RNF149Q8NC42 400 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 C10orf82Q8WW14 230 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 SLC44A1Q8WWI5 657 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 RTP4Q96DX8 246 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 PPP1R2P1Q96PQ5 205 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 NUDCD1Q96RS6 583 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 TMEM121Q9BTD3 319 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 NT5C1AQ9BXI3 368 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 CALN1Q9BXU9 219 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 INO80BQ9C086 356 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 MTMR12Q9C0I1 747 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 MYLK2Q9H1R3 596 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 FZD8Q9H461 694 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 PLEKHA5Q9HAU0 1116 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 ACP6Q9NPH0 428 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 HACD3Q9P035 362 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 TXNDC16Q9P2K2 825 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 RCOR3Q9P2K3 495 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 ZNF212Q9UDV6 495 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 CHORDC1Q9UHD1 332 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 HACL1Q9UJ83 578 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 GRID1Q9ULK0 1009 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 CORO1CQ9ULV4 474 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 BARX2Q9UMQ3 279 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-249ENST00000564606 SSX2IPQ9Y2D8 614 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 RAD54BQ9Y620 910 aa7.95□□□□□ -1.14
ATXN3-249ENST00000564606 IGKV6-21A0A0C4DH24 114 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 TMEM150BA6NC51 233 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 KBTBD13C9JR72 458 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 SPECC1L-ADORA2AF8WAN1 911 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 PI4K2BG5E9Z4 385 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 GOLGA8SH3BPF8 625 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 INO80B-WBP1J3KQ70 363 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 M0QYV0 167 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 CXCL11O14625 94 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 MTSS1O43312 755 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 DIAPH2O60879 1101 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 FKBP6O75344 327 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 SPAG7O75391 227 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 LRCH4O75427 683 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 CSDE1O75534 798 aaKnown RBP7.94□□□□□ -1.14
ATXN3-249ENST00000564606 KRT16P08779 473 aa7.94□□□□□ -1.14
ATXN3-249ENST00000564606 KRT10P13645 584 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms