RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 CLDN23Q96B33 292 aa8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 MSANTD3Q96H12 275 aa8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 SLITRK1Q96PX8 696 aa8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 PHOX2BQ99453 314 aa8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 SRRTQ9BXP5 876 aaKnown RBP8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 RNF38Q9H0F5 515 aa8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 IRF2BPLQ9H1B7 796 aa8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 FAM124BQ9H5Z6 455 aaPredicted RBP8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 HPS4Q9NQG7 708 aa8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 GKN1Q9NS71 199 aa8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 FAM86C1Q9NVL1 165 aa8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 THG1LQ9NWX6 298 aaKnown RBP8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 COMMD8Q9NX08 183 aa8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 RWDD2AQ9UIY3 292 aa8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 NDRG2Q9UN36 371 aaKnown RBP8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 ARHGAP26Q9UNA1 814 aa8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 MRPS17Q9Y2R5 130 aaKnown RBP8.71□□□□□ -1.02
NSMCE1-207ENST00000564342 SPECC1L-ADORA2AF8WAN1 911 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 NCAM2O15394 837 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 P4HA2O15460 535 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 GNA14O95837 355 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 ABL1P00519 1130 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 ZDHHC11BP0C7U3 371 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 FAM200BP0CF97 657 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 TRIM21P19474 475 aaKnown RBP8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 CTHP32929 405 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 MAGEA9P43362 315 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 RPS9P46781 194 aaKnown RBP8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 PDE6CP51160 858 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 KPNA1P52294 538 aaPredicted RBP8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 SLC7A9P82251 487 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 RUNX3Q13761 415 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 ITPRIPL2Q3MIP1 535 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 PPP1R26Q5T8A7 1209 aaPredicted RBP8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 SNX30Q5VWJ9 437 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 ARHGAP17Q68EM7 881 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 TRIM68Q6AZZ1 485 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 GPRIN1Q7Z2K8 1008 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 RALGPS2Q86X27 583 aaPredicted RBP8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 MAML2Q8IZL2 1156 aaPredicted RBP8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 MLKLQ8NB16 471 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 PDZD8Q8NEN9 1154 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 LMO3Q8TAP4 145 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 SH3RF2Q8TEC5 729 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 ATOH1Q92858 354 aaPredicted RBP8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 FBXO32Q969P5 355 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 CHFRQ96EP1 664 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 TMEM176AQ96HP8 235 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 NUP62CLQ9H1M0 184 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 EBF3Q9H4W6 596 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 C8orf33Q9H7E9 229 aaPredicted RBP8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 PNPLA8Q9NP80 782 aa8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 CHORDC1Q9UHD1 332 aaPredicted RBP8.7□□□□□ -1.02
NSMCE1-207ENST00000564342 OTOL1A6NHN0 477 aaPredicted RBP8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 LEFTY2O00292 366 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 FGFR1OPO95684 399 aaKnown RBP8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 AFPP02771 609 aaKnown RBP8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 CCDC192P0DO97 292 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 CHRNB1P11230 501 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 ARSAP15289 507 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 ACO1P21399 889 aaKnown RBP8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 TBXAS1P24557 533 aaPredicted RBP8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 PGFP49763 221 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 KCNH2Q12809 1159 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 LRMPQ12912 555 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 PDGFRLQ15198 375 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 EML3Q32P44 896 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 DPCR1Q3MIW9 517 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 CC2D1AQ6P1N0 951 aaPredicted RBP8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 C1orf228Q6PIY5 440 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 IRF2BP1Q8IU81 584 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 C1orf210Q8IVY1 113 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 OSCP1Q8WVF1 389 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 KAT5Q92993 513 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 JAKMIP2Q96AA8 810 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 HEXIM2Q96MH2 286 aaKnown RBP8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 NT5C1BQ96P26 610 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 IPO9Q96P70 1041 aaKnown RBP8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 GBP4Q96PP9 640 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 DUSP16Q9BY84 665 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 DNAI2Q9GZS0 605 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 CHRDQ9H2X0 955 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 FBXO44Q9H4M3 255 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 LMAN1LQ9HAT1 526 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 GMIPQ9P107 970 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 CPQQ9Y646 472 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 WNT6Q9Y6F9 365 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 WDFY4Q6ZS81 3184 aa8.69□□□□□ -1.02
NSMCE1-207ENST00000564342 PROB1E7EW31 1015 aa8.68□□□□□ -1.02
NSMCE1-207ENST00000564342 COCHO43405 550 aa8.68□□□□□ -1.02
NSMCE1-207ENST00000564342 MBL2P11226 248 aaPredicted RBP8.68□□□□□ -1.02
NSMCE1-207ENST00000564342 GJA4P35212 333 aa8.68□□□□□ -1.02
NSMCE1-207ENST00000564342 NBL1P41271 181 aa8.68□□□□□ -1.02
NSMCE1-207ENST00000564342 IFNAR2P48551 515 aa8.68□□□□□ -1.02
NSMCE1-207ENST00000564342 TUBP50607 506 aa8.68□□□□□ -1.02
NSMCE1-207ENST00000564342 KIF11P52732 1056 aa8.68□□□□□ -1.02
NSMCE1-207ENST00000564342 YWHAEP62258 255 aaKnown RBP8.68□□□□□ -1.02
NSMCE1-207ENST00000564342 CETN1Q12798 172 aa8.68□□□□□ -1.02
NSMCE1-207ENST00000564342 GAS6Q14393 721 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms