RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 SNRNP48Q6IEG0 339 aaKnown RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 TTC7BQ86TV6 843 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 DDHD1Q8NEL9 900 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 SHC3Q92529 594 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 TIPINQ9BVW5 301 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 NIF3L1Q9GZT8 377 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 ILKAPQ9H0C8 392 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 RPS6KL1Q9Y6S9 549 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 COMMD3-BMI1R4GMX3 469 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 NFAT5O94916 1531 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 NID2Q14112 1375 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 ADGRA3Q8IWK6 1321 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 PRR5-ARHGAP8B1AHC4 643 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 LIASO43766 372 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 ARHGAP8P85298 464 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 CCDC15Q0P6D6 951 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 NME3Q13232 169 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 LIN52Q52LA3 116 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 RBM15BQ8NDT2 890 aaKnown RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 USP6NLQ92738 828 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 SPC25Q9HBM1 224 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 TMEM165Q9HC07 324 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 JPH1Q9HDC5 661 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 KCNK4Q9NYG8 393 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 POLLQ9UGP5 575 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 ABCC6O95255 1503 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 ZMYM2Q9UBW7 1377 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 DDTLA6NHG4 134 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-209ENST00000564068 GSTA4O15217 222 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 TBX10O75333 385 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 E2F6O75461 281 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 ADRB2P07550 413 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 VAV1P15498 845 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 GLRBP48167 497 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 GSTA3Q16772 222 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 RWDD4Q6NW29 188 aaKnown RBP13.06□□□□□ -0.32
COMMD4-209ENST00000564068 RBM44Q6ZP01 1051 aaKnown RBP13.06□□□□□ -0.32
COMMD4-209ENST00000564068 EGFL6Q8IUX8 553 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 SIX6OS1Q8N1H7 587 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 ZSCAN18Q8TBC5 510 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-209ENST00000564068 DIS3LQ8TF46 1054 aaKnown RBP13.06□□□□□ -0.32
COMMD4-209ENST00000564068 WDR60Q8WVS4 1066 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 CDRT15Q96T59 188 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 TRIM15Q9C019 465 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 AVENQ9NQS1 362 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-209ENST00000564068 FAM49BQ9NUQ9 324 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 THAP1Q9NVV9 213 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 FBXO40Q9UH90 709 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 ZNF229Q9UJW7 825 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 SNX5Q9Y5X3 404 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 RTN3O95197 1032 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-209ENST00000564068 SPRP35270 261 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-209ENST00000564068 SLC1A6P48664 564 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 JAM2P57087 298 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 PRKCEQ02156 737 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 NRF1Q16656 503 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 GPR141Q7Z602 305 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 DHDDSQ86SQ9 333 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 RTKN2Q8IZC4 609 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 ZNF398Q8TD17 642 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 TMC2Q8TDI7 906 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 NR1H4Q96RI1 486 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-209ENST00000564068 CRAMP1Q96RY5 1269 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 TAS2R1Q9NYW7 299 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 GLRA3O75311 464 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 ABHD2P08910 425 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 ADORA2BP29275 332 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 MSX2P35548 267 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-209ENST00000564068 CHN2P52757 468 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 NCKAP1LP55160 1127 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 NLRP11P59045 1033 aaKnown RBP13.06□□□□□ -0.32
COMMD4-209ENST00000564068 SPP2Q13103 211 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 DCTN2Q13561 401 aaKnown RBP13.06□□□□□ -0.32
COMMD4-209ENST00000564068 B3GNT6Q6ZMB0 384 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 ZBTB46Q86UZ6 589 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 KATNAL2Q8IYT4 538 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 TAAR1Q96RJ0 339 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 MTMR12Q9C0I1 747 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 RPL26L1Q9UNX3 145 aaKnown RBP13.06□□□□□ -0.32
COMMD4-209ENST00000564068 FRMPD4Q14CM0 1322 aa13.06□□□□□ -0.32
COMMD4-209ENST00000564068 SNRPFP62306 86 aaKnown RBP13.05□□□□□ -0.32
COMMD4-209ENST00000564068 YWHAHQ04917 246 aaPredicted RBP13.05□□□□□ -0.32
COMMD4-209ENST00000564068 ACVR2BQ13705 512 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 ANO4Q32M45 955 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 CNDP1Q96KN2 507 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 KREMEN1Q96MU8 473 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 TMEM79Q9BSE2 394 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 SIX2Q9NPC8 291 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 PKD2L2Q9NZM6 624 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 ORC6Q9Y5N6 252 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 PPP1R11O60927 126 aaPredicted RBP13.05□□□□□ -0.32
COMMD4-209ENST00000564068 TNFAIP8O95379 198 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 MT-CO1P00395 513 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 LCP1P13796 627 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 CPA3P15088 417 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 ECHS1P30084 290 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 ATP1A4Q13733 1029 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 MTHFD1LQ6UB35 978 aa13.05□□□□□ -0.32
COMMD4-209ENST00000564068 NET1Q7Z628 596 aaPredicted RBP13.05□□□□□ -0.32
COMMD4-209ENST00000564068 ZNF384Q8TF68 577 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms