RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 EOGTQ5NDL2 527 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 TRMT11Q7Z4G4 463 aaKnown RBP10.13□□□□□ -0.79
CLN6-203ENST00000563917 ACOT1Q86TX2 421 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 FAM35AQ86V20 835 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 UNC93AQ86WB7 457 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 ADGRG2Q8IZP9 1017 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 TMC2Q8TDI7 906 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 SPACA7Q96KW9 195 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 RNF38Q9H0F5 515 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 XYLT2Q9H1B5 865 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 POLMQ9NP87 494 aaPredicted RBP10.13□□□□□ -0.79
CLN6-203ENST00000563917 ARHGEF4Q9NR80 690 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 TLR8Q9NR97 1041 aaKnown RBP10.13□□□□□ -0.79
CLN6-203ENST00000563917 KRT82Q9NSB4 513 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 BCCIPQ9P287 314 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLN6-203ENST00000563917 EBF1Q9UH73 591 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 CHORDC1Q9UHD1 332 aaPredicted RBP10.13□□□□□ -0.79
CLN6-203ENST00000563917 CACNA1AO00555 2505 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 ANAPC1Q9H1A4 1944 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 ATG2BQ96BY7 2078 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 TBC1D3BA6NDS4 549 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 MAP3K13O43283 966 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 ACTN4O43707 911 aaKnown RBP10.12□□□□□ -0.79
CLN6-203ENST00000563917 KAT7O95251 611 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 OLFM2O95897 454 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 OAS1P00973 400 aaKnown RBP10.12□□□□□ -0.79
CLN6-203ENST00000563917 C4BPAP04003 597 aaKnown RBP10.12□□□□□ -0.79
CLN6-203ENST00000563917 FAM200BP0CF97 657 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 PFKFB1P16118 471 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 GRIA2P42262 883 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 RAP1GAPP47736 663 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 TUBP50607 506 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 VAMP7P51809 220 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 SLC5A3P53794 718 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 CLDN10P78369 228 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 SF3A2Q15428 464 aaKnown RBP10.12□□□□□ -0.79
CLN6-203ENST00000563917 ANO4Q32M45 955 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 ZACNQ401N2 412 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 PLK5Q496M5 336 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 NAIF1Q69YI7 327 aaPredicted RBP10.12□□□□□ -0.79
CLN6-203ENST00000563917 ANO7Q6IWH7 933 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 INTS8Q75QN2 995 aaKnown RBP10.12□□□□□ -0.79
CLN6-203ENST00000563917 PGBD3Q8N328 593 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 KIAA0895Q8NCT3 520 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 USP33Q8TEY7 942 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 KCNK16Q96T55 309 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 SCAND2PQ9GZW5 306 aaPredicted RBP10.12□□□□□ -0.79
CLN6-203ENST00000563917 LSM7Q9UK45 103 aaKnown RBP10.12□□□□□ -0.79
CLN6-203ENST00000563917 MMP17Q9ULZ9 603 aa10.12□□□□□ -0.79
CLN6-203ENST00000563917 HELZP42694 1942 aaKnown RBP10.11□□□□□ -0.79
CLN6-203ENST00000563917 GREB1Q4ZG55 1949 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 MAPK13O15264 365 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 COCHO43405 550 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 KLRC4O43908 158 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 GDF9O60383 454 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 CAVIN2O95810 425 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 ADRB1P08588 477 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 NR2F2P24468 414 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 TIE1P35590 1138 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 OPRD1P41143 372 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 TNFRSF4P43489 277 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 NDST1P52848 882 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 LIMK1P53667 647 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 CACNA2D1P54289 1103 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 MAP3K7CLP57077 242 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 CCDC6Q16204 474 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 CRY1Q16526 586 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 LY6G5CQ5SRR4 150 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 RNF43Q68DV7 783 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 SDE2Q6IQ49 451 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 SV2AQ7L0J3 742 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 TADA2BQ86TJ2 420 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 TTC39CQ8N584 583 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 CCDC33Q8N5R6 958 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 SCAMP5Q8TAC9 235 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 SLC2A14Q8TDB8 520 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 WHAMMQ8TF30 809 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 TMEM174Q8WUU8 243 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 CHAMP1Q96JM3 812 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 CNOT6LQ96LI5 555 aaKnown RBP10.11□□□□□ -0.79
CLN6-203ENST00000563917 XPO6Q96QU8 1125 aaKnown RBP10.11□□□□□ -0.79
CLN6-203ENST00000563917 TPSD1Q9BZJ3 242 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 DUSP15Q9H1R2 295 aaPredicted RBP10.11□□□□□ -0.79
CLN6-203ENST00000563917 KCTD10Q9H3F6 313 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 CYP3A43Q9HB55 503 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.11□□□□□ -0.795e-7■■■■■ 90.8
CLN6-203ENST00000563917 FAM49BQ9NUQ9 324 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 DMAC2Q9NW81 257 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 DEC1Q9P2X7 70 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 PTPRDP23468 1912 aa10.11□□□□□ -0.79
CLN6-203ENST00000563917 GOLGA6L4A6NEF3 574 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 K7EQS6 105 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 SCAMP3O14828 347 aaKnown RBP10.1□□□□□ -0.79
CLN6-203ENST00000563917 KHNYNO15037 678 aaKnown RBP10.1□□□□□ -0.79
CLN6-203ENST00000563917 STX10O60499 249 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 TLR5O60602 858 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 VNN1O95497 513 aa10.1□□□□□ -0.79
CLN6-203ENST00000563917 KLF8O95600 359 aaPredicted RBP10.1□□□□□ -0.79
CLN6-203ENST00000563917 ASS1P00966 412 aaKnown RBP10.1□□□□□ -0.79
CLN6-203ENST00000563917 HLA-DRAP01903 254 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms