RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 TDHQ8IZJ6 230 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 ABI1Q8IZP0 508 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 LRRC43Q8N309 656 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 GOLM1Q8NBJ4 401 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 RNF214Q8ND24 703 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 ST13P5Q8NFI4 369 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 URGCPQ8TCY9 931 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 BCL7CQ8WUZ0 217 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 RSPH1Q8WYR4 309 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 CCDC127Q96BQ5 260 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 RPS6KC1Q96S38 1066 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 TSPAN18Q96SJ8 248 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 YME1L1Q96TA2 773 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 RAD9AQ99638 391 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 PAAF1Q9BRP4 392 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 MTMR12Q9C0I1 747 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 MARCH5Q9NX47 278 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 CRIM1Q9NZV1 1036 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 DNAJB4Q9UDY4 337 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 UBQLN1Q9UMX0 589 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 TLR6Q9Y2C9 796 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 HIF3AQ9Y2N7 669 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 YBX2Q9Y2T7 364 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 C2CD2Q9Y426 696 aa5.59□□□□□ -1.51
HERPUD1-207ENST00000563781 PTPRSQ13332 1948 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 LINC01553A4QN01 128 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 LRRC10BA6NIK2 292 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 LGALS16A8MUM7 142 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 BECN2A8MW95 431 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 PODXLO00592 558 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 PMM2O15305 246 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 LRRN2O75325 713 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 EFEMP2O95967 443 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 CST3P01034 146 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 HLA-DRAP01903 254 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 AFPP02771 609 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 GALTP07902 379 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 FURINP09958 794 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 TMEM191BP0C7N4 346 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 TNNI1P19237 187 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 CYP3A5P20815 502 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 POLR2BP30876 1174 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 PBX3P40426 434 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 MTIF2P46199 727 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 GCLMP48507 274 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 AARSP49588 968 aaKnown RBP eCLIP5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 CDKN1CP49918 316 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 MXI1P50539 228 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 COPB1P53618 953 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 AP3M2P53677 418 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 BIRC2Q13490 618 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 BTG3Q14201 252 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 NFE2Q16621 373 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 MAN2A1Q16706 1144 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 UPP1Q16831 310 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 LONRF2Q1L5Z9 754 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 C4orf46Q504U0 113 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 EPC2Q52LR7 807 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 SGO2Q562F6 1265 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 TCERG1LQ5VWI1 586 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 C9orf57Q5W0N0 161 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 CDPF1Q6NVV7 123 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 DPY19L2P1Q6NXN4 242 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 TMEM173Q86WV6 379 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 C19orf47Q8N9M1 422 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 BEST2Q8NFU1 509 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 RABGGTAQ92696 567 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 SEMA4DQ92854 862 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 GAL3ST3Q96A11 431 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 ANKRD36BP1Q96IX9 119 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 FANCD2OSQ96PS1 177 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 FNBP1Q96RU3 617 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 TMEM175Q9BSA9 504 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 TUBGCP2Q9BSJ2 902 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 ANP32EQ9BTT0 268 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 MRPL9Q9BYD2 267 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 XYLT2Q9H1B5 865 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 VPS16Q9H269 839 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 TMEM8AQ9HCN3 771 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 SLC38A7Q9NVC3 462 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 DPP3Q9NY33 737 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 PPT2Q9UMR5 302 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 AP4E1Q9UPM8 1137 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 COQ4Q9Y3A0 265 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 INSL6Q9Y581 213 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 PCDHA11Q9Y5I1 949 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 ACTL7BQ9Y614 415 aa5.58□□□□□ -1.52
HERPUD1-207ENST00000563781 TRIOBPQ9H2D6 2365 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 CDH23Q9H251 3354 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 A0A1W2PPC1 479 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 HMGB1P1B2RPK0 211 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 NT5C1B-RDH14C9J2C7 533 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 GOLGA6L19H0YKK7 550 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 TMEM189-UBE2V1I3L0A0 370 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 PIRO00625 290 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 NRP1O14786 923 aa5.57□□□□□ -1.52
HERPUD1-207ENST00000563781 P4HA2O15460 535 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms