RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 TDGF1P13385 188 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 ARSAP15289 507 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 NBL1P41271 181 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 TUBP50607 506 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 KIF11P52732 1056 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 UBXN2BQ14CS0 331 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 CCDC40Q4G0X9 1142 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 RALGPS2Q86X27 583 aaPredicted RBP15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 YAF2Q8IY57 180 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 CCDC150Q8NCX0 1101 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 EHBP1Q8NDI1 1231 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 PDZD8Q8NEN9 1154 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 SH3RF2Q8TEC5 729 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 OSCP1Q8WVF1 389 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 FAM3CQ92520 227 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 NELL1Q92832 810 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 SLITRK1Q96PX8 696 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 NUP62CLQ9H1M0 184 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 CHRDQ9H2X0 955 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 C8orf33Q9H7E9 229 aaPredicted RBP15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 NMUR1Q9HB89 426 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 TRPC7Q9HCX4 862 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 GMIPQ9P107 970 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 SCML2Q9UQR0 700 aa15.65■□□□□ 0.1
RPUSD1-204ENST00000563560 LEFTY2O00292 366 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 TULP2O00295 520 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 GABBR2O75899 941 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 CKMP06732 381 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 CHRM1P11229 460 aaPredicted RBP15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 MAGEA9P43362 315 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 GCNT1Q02742 428 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 RUNX3Q13761 415 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 CCINQ13939 588 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 ITPRIPL2Q3MIP1 535 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 NAIF1Q69YI7 327 aaPredicted RBP15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 SCD5Q86SK9 330 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 C1orf210Q8IVY1 113 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 ZNF276Q8N554 614 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 TFAP2BQ92481 460 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 EZH1Q92800 747 aaPredicted RBP15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 FBXO32Q969P5 355 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 WBP2Q969T9 261 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 CNOT6LQ96LI5 555 aaKnown RBP15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 UBXN6Q9BZV1 441 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 EBF3Q9H4W6 596 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 CCSER2Q9H7U1 834 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 CYLDQ9NQC7 956 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 PRMT8Q9NR22 394 aaPredicted RBP15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 FAM86C1Q9NVL1 165 aa15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 CHORDC1Q9UHD1 332 aaPredicted RBP15.64■□□□□ 0.09
RPUSD1-204ENST00000563560 OTOGLQ3ZCN5 2332 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 O00370 1275 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 STK25O00506 426 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 CYP26A1O43174 497 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 AFPP02771 609 aaKnown RBP15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 TBXAS1P24557 533 aaPredicted RBP15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 LRMPQ12912 555 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 CCDC186Q7Z3E2 898 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 ANKRD52Q8NB46 1076 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 TTC8Q8TAM2 541 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 CSGALNACT1Q8TDX6 532 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 HEXIM2Q96MH2 286 aaKnown RBP15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 NT5C1BQ96P26 610 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 LINC00597Q9H2U6 94 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 FBRSL1Q9HCM7 1045 aaKnown RBP15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 THG1LQ9NWX6 298 aaKnown RBP15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 CPQQ9Y646 472 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 WNT6Q9Y6F9 365 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 RIF1Q5UIP0 2472 aaKnown RBP15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 GVINP1Q7Z2Y8 2422 aa15.63■□□□□ 0.09
RPUSD1-204ENST00000563560 DMXL1Q9Y485 3027 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 CLSTN1O94985 981 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 ERCC5P28715 1186 aaPredicted RBP15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 PDE6CP51160 858 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 IFRD2Q12894 506 aaPredicted RBP15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 MTAPQ13126 283 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 PDGFRLQ15198 375 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 TMEM196Q5HYL7 178 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 MIIPQ5JXC2 388 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 FSTL4Q6MZW2 842 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 C1orf228Q6PIY5 440 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 INTS2Q9H0H0 1204 aaKnown RBP15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 FBXO44Q9H4M3 255 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 THAP9Q9H5L6 903 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 ECT2Q9H8V3 914 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 SIX2Q9NPC8 291 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 C2orf42Q9NWW7 574 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 TSPAN16Q9UKR8 245 aa15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 NDRG2Q9UN36 371 aaKnown RBP15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 MRPS17Q9Y2R5 130 aaKnown RBP15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.62■□□□□ 0.09
RPUSD1-204ENST00000563560 DCHS1Q96JQ0 3298 aa15.61■□□□□ 0.09
RPUSD1-204ENST00000563560 TRDMT1O14717 391 aaKnown RBP15.61■□□□□ 0.09
RPUSD1-204ENST00000563560 SP9P0CG40 484 aa15.61■□□□□ 0.09
RPUSD1-204ENST00000563560 CCDC192P0DO97 292 aa15.61■□□□□ 0.09
RPUSD1-204ENST00000563560 GJA4P35212 333 aa15.61■□□□□ 0.09
RPUSD1-204ENST00000563560 RPL34P49207 117 aaKnown RBP15.61■□□□□ 0.09
RPUSD1-204ENST00000563560 APBA1Q02410 837 aa15.61■□□□□ 0.09
RPUSD1-204ENST00000563560 PON2Q15165 354 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms