RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 SLC9A9Q8IVB4 645 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 C12orf50Q8NA57 414 aaPredicted RBP22.26■■□□□ 1.15
CHD9-208ENST00000563410 CCDC26Q8TAB7 109 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 SCAMP5Q8TAC9 235 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 OVCA2Q8WZ82 227 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 PAGE5Q96GU1 130 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 ZFRQ96KR1 1074 aaKnown RBP22.26■■□□□ 1.15
CHD9-208ENST00000563410 IL37Q9NZH6 218 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 CFAP45Q9UL16 551 aa22.26■■□□□ 1.15
CHD9-208ENST00000563410 SLC9A3R1O14745 358 aaPredicted RBP22.25■■□□□ 1.15
CHD9-208ENST00000563410 TM4SF5O14894 197 aa22.25■■□□□ 1.15
CHD9-208ENST00000563410 CHRM1P11229 460 aaPredicted RBP22.25■■□□□ 1.15
CHD9-208ENST00000563410 SLC6A11P48066 632 aa22.25■■□□□ 1.15
CHD9-208ENST00000563410 DGKEP52429 567 aa22.25■■□□□ 1.15
CHD9-208ENST00000563410 RASSF3Q86WH2 238 aa22.25■■□□□ 1.15
CHD9-208ENST00000563410 C12orf40Q86WS4 652 aa22.25■■□□□ 1.15
CHD9-208ENST00000563410 SFTPA1Q8IWL2 248 aa22.25■■□□□ 1.15
CHD9-208ENST00000563410 PDZD8Q8NEN9 1154 aa22.25■■□□□ 1.15
CHD9-208ENST00000563410 TSTD1Q8NFU3 115 aa22.25■■□□□ 1.15
CHD9-208ENST00000563410 FBXO32Q969P5 355 aa22.25■■□□□ 1.15
CHD9-208ENST00000563410 CHORDC1Q9UHD1 332 aaPredicted RBP22.25■■□□□ 1.15
CHD9-208ENST00000563410 MMP17Q9ULZ9 603 aa22.25■■□□□ 1.15
CHD9-208ENST00000563410 GON4LQ3T8J9 2241 aa22.25■■□□□ 1.15
CHD9-208ENST00000563410 PLXND1Q9Y4D7 1925 aa22.24■■□□□ 1.15
CHD9-208ENST00000563410 COCHO43405 550 aa22.24■■□□□ 1.15
CHD9-208ENST00000563410 HSP90AA1P07900 732 aaKnown RBP22.24■■□□□ 1.15
CHD9-208ENST00000563410 SLC5A3P53794 718 aa22.24■■□□□ 1.15
CHD9-208ENST00000563410 SNX30Q5VWJ9 437 aa22.24■■□□□ 1.15
CHD9-208ENST00000563410 DDX42Q86XP3 938 aaKnown RBP eCLIP22.24■■□□□ 1.15
CHD9-208ENST00000563410 TNIP3Q96KP6 325 aa22.24■■□□□ 1.15
CHD9-208ENST00000563410 MED10Q9BTT4 135 aa22.24■■□□□ 1.15
CHD9-208ENST00000563410 TPSD1Q9BZJ3 242 aa22.24■■□□□ 1.15
CHD9-208ENST00000563410 EXOC1Q9NV70 894 aa22.24■■□□□ 1.15
CHD9-208ENST00000563410 TNRC6BQ9UPQ9 1833 aaKnown RBP22.23■■□□□ 1.15
CHD9-208ENST00000563410 FAM92AA1XBS5 289 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 PDXKO00764 312 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 HNRNPLP14866 589 aaKnown RBP eCLIP22.23■■□□□ 1.15
CHD9-208ENST00000563410 EIF2DP41214 584 aaKnown RBP22.23■■□□□ 1.15
CHD9-208ENST00000563410 MRPS21P82921 87 aaKnown RBP22.23■■□□□ 1.15
CHD9-208ENST00000563410 ELF2Q15723 593 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 ZACNQ401N2 412 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 IL31Q6EBC2 164 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 ACOT1Q86TX2 421 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 FUKQ8N0W3 1084 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 CCDC33Q8N5R6 958 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 SPRYD3Q8NCJ5 442 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 ZMIZ2Q8NF64 920 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 SMARCD1Q96GM5 515 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 DMAP1Q9NPF5 467 aaPredicted RBP22.23■■□□□ 1.15
CHD9-208ENST00000563410 VPS45Q9NRW7 570 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 INVSQ9Y283 1065 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 ATP8B3O60423 1300 aa22.23■■□□□ 1.15
CHD9-208ENST00000563410 PI4KAP42356 2102 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 A0A0A0MRY4 1105 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 A0A1B0GVL5 298 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 E2F8A0AVK6 867 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 BEST1O76090 585 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 RHOBTB1O94844 696 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 ZDHHC11BP0C7U3 371 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 PFKFB1P16118 471 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 CRY1Q16526 586 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 C1orf220Q5T0J3 134 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 HECTD3Q5T447 861 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 STPG1Q5TH74 334 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 TCEAL6Q6IPX3 200 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 TMEM92Q6UXU6 159 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 DDX1Q92499 740 aaKnown RBP22.22■■□□□ 1.15
CHD9-208ENST00000563410 TCEAL3Q969E4 200 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 PNKPQ96T60 521 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 SMOQ99835 787 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 CCSER2Q9H7U1 834 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 TBC1D14Q9P2M4 693 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 HMGXB4Q9UGU5 601 aa22.22■■□□□ 1.15
CHD9-208ENST00000563410 CEP192Q8TEP8 1941 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 BCLAF3A2AJT9 711 aaKnown RBP22.21■■□□□ 1.15
CHD9-208ENST00000563410 AP1G2O75843 785 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 CLSTN1O94985 981 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 KAT7O95251 611 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 ADH1CP00326 375 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 NR3C1P04150 777 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 ADH5P11766 374 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 CCDC130P13994 396 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 TUBP50607 506 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 ORC1Q13415 861 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 SGSM1Q2NKQ1 1148 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 LY6G5CQ5SRR4 150 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 ANO7Q6IWH7 933 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 SV2AQ7L0J3 742 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 CRYBG2Q8N1P7 616 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 PHTF2Q8N3S3 785 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 IL17RCQ8NAC3 791 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 MDGA1Q8NFP4 955 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 TMC2Q8TDI7 906 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 WBP2Q969T9 261 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 CNOT6LQ96LI5 555 aaKnown RBP22.21■■□□□ 1.15
CHD9-208ENST00000563410 KRT82Q9NSB4 513 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 COMMD8Q9NX08 183 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 GMIPQ9P107 970 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 HPSEQ9Y251 543 aa22.21■■□□□ 1.15
CHD9-208ENST00000563410 APODP05090 189 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms