RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 CYP4A22Q5TCH4 519 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 WDR93Q6P2C0 686 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 NECAB2Q7Z6G3 386 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 RTN4RL1Q86UN2 441 aaPredicted RBP10.19□□□□□ -0.78
UBFD1-202ENST00000563366 TTC30AQ86WT1 665 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 KATNAL2Q8IYT4 538 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 TMEM130Q8N3G9 435 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 DNAJC5GQ8N7S2 189 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 EXD1Q8NHP7 514 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 UBA3Q8TBC4 463 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 SLC2A14Q8TDB8 520 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 DUSP16Q9BY84 665 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 OXCT2Q9BYC2 517 aaPredicted RBP10.19□□□□□ -0.78
UBFD1-202ENST00000563366 DPEP3Q9H4B8 488 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 SLITRK6Q9H5Y7 841 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 RNF19AQ9NV58 838 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 TMEM39AQ9NV64 488 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 TBC1D13Q9NVG8 400 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 ASNSD1Q9NWL6 643 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.19□□□□□ -0.78
UBFD1-202ENST00000563366 CYTH4Q9UIA0 394 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 TBX21Q9UL17 535 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 ATP11BQ9Y2G3 1177 aa10.19□□□□□ -0.78
UBFD1-202ENST00000563366 V9GYY5 206 aaPredicted RBP10.19□□□□□ -0.78
UBFD1-202ENST00000563366 FAM170AA1A519 330 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 TMEM229AB2RXF0 380 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 E5RJQ4 531 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 GOLGA8SH3BPF8 625 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 PDE2AO00408 941 aaPredicted RBP10.18□□□□□ -0.78
UBFD1-202ENST00000563366 SYN3O14994 580 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 FBXO21O94952 628 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 ZIC2O95409 532 aaPredicted RBP10.18□□□□□ -0.78
UBFD1-202ENST00000563366 FGGP02679 453 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 ADH1AP07327 375 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 PFKMP08237 780 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 CCDC130P13994 396 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 PSMA2P25787 234 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 ADORA2BP29275 332 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 SSR1P43307 286 aaKnown RBP10.18□□□□□ -0.78
UBFD1-202ENST00000563366 RPL34P49207 117 aaKnown RBP10.18□□□□□ -0.78
UBFD1-202ENST00000563366 AFF1P51825 1210 aaKnown RBP10.18□□□□□ -0.78
UBFD1-202ENST00000563366 RPL7AP62424 266 aaKnown RBP10.18□□□□□ -0.78
UBFD1-202ENST00000563366 SLC6A3Q01959 620 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 YWHAHQ04917 246 aaPredicted RBP10.18□□□□□ -0.78
UBFD1-202ENST00000563366 C2orf54Q08AI8 447 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 BRD3Q15059 726 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 TIGD5Q53EQ6 642 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 EFHC1Q5JVL4 640 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 OVOS1Q6IE37 1185 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 OR6B2Q6IFH4 312 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 C4orf50Q6ZRC1 276 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 TRIM67Q6ZTA4 783 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 SLC26A9Q7LBE3 791 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 MAATS1Q7Z4T9 603 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 OSTM1Q86WC4 334 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 COLGALT2Q8IYK4 626 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 FUKQ8N0W3 1084 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 LRRC43Q8N309 656 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 NOA1Q8NC60 698 aaKnown RBP10.18□□□□□ -0.78
UBFD1-202ENST00000563366 LRRN4CLQ8ND94 238 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 C3orf58Q8NDZ4 430 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 CCDC26Q8TAB7 109 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 MYCBPAPQ8TBZ2 947 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 KCTD13Q8WZ19 329 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 ALG3Q92685 438 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 ITPKCQ96DU7 683 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 SMARCD1Q96GM5 515 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 MS4A14Q96JA4 679 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 BTBD6Q96KE9 485 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 TMEM175Q9BSA9 504 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 CNPY3Q9BT09 278 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 MED10Q9BTT4 135 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 TRIM62Q9BVG3 475 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 COLEC11Q9BWP8 271 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 UBXN6Q9BZV1 441 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 PNPLA8Q9NP80 782 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 METTL5Q9NRN9 209 aaKnown RBP10.18□□□□□ -0.78
UBFD1-202ENST00000563366 HOMER3Q9NSC5 361 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.18□□□□□ -0.78
UBFD1-202ENST00000563366 CHORDC1Q9UHD1 332 aaPredicted RBP10.18□□□□□ -0.78
UBFD1-202ENST00000563366 TMEM59LQ9UK28 342 aa10.18□□□□□ -0.78
UBFD1-202ENST00000563366 NLRC5Q86WI3 1866 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 SF3B1O75533 1304 aaKnown RBP eCLIP10.17□□□□□ -0.788e-13■■■■■ 68.9
UBFD1-202ENST00000563366 ABHD14A-ACY1A0A1B0GW23 586 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 PRMT3O60678 531 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 ZRANB2O95218 330 aaKnown RBP eCLIP10.17□□□□□ -0.78
UBFD1-202ENST00000563366 GLI1P08151 1106 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 GPD1P21695 349 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 SDC4P31431 198 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 RFC1P35251 1148 aaPredicted RBP10.17□□□□□ -0.78
UBFD1-202ENST00000563366 PCK1P35558 622 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 OR1G1P47890 313 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 ZNF143P52747 638 aaPredicted RBP10.17□□□□□ -0.78
UBFD1-202ENST00000563366 CBLBQ13191 982 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 SMC1AQ14683 1233 aaKnown RBP10.17□□□□□ -0.78
UBFD1-202ENST00000563366 PTPROQ16827 1216 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 MDH1BQ5I0G3 518 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 DCAF12L1Q5VU92 463 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 PMF1Q6P1K2 205 aa10.17□□□□□ -0.78
UBFD1-202ENST00000563366 CC2D1AQ6P1N0 951 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms