RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SCML2Q9UQR0 700 aa19.81■□□□□ 0.76
RAB40C-207ENST00000563109 GRXCR2A6NFK2 248 aa19.8■□□□□ 0.76
RAB40C-207ENST00000563109 ZBED1O96006 694 aa19.8■□□□□ 0.76
RAB40C-207ENST00000563109 CYP1A1P04798 512 aaPredicted RBP19.8■□□□□ 0.76
RAB40C-207ENST00000563109 PTCRAQ6ISU1 281 aaPredicted RBP19.8■□□□□ 0.76
RAB40C-207ENST00000563109 GET4Q7L5D6 327 aaPredicted RBP19.8■□□□□ 0.76
RAB40C-207ENST00000563109 CCDC186Q7Z3E2 898 aa19.8■□□□□ 0.76
RAB40C-207ENST00000563109 ERICH1Q86X53 443 aa19.8■□□□□ 0.76
RAB40C-207ENST00000563109 ARHGAP18Q8N392 663 aa19.8■□□□□ 0.76
RAB40C-207ENST00000563109 WDTC1Q8N5D0 677 aa19.8■□□□□ 0.76
RAB40C-207ENST00000563109 MRPS31Q92665 395 aaKnown RBP19.8■□□□□ 0.76
RAB40C-207ENST00000563109 SYT11Q9BT88 431 aa19.8■□□□□ 0.76
RAB40C-207ENST00000563109 ULBP1Q9BZM6 244 aa19.8■□□□□ 0.76
RAB40C-207ENST00000563109 ATXN3LQ9H3M9 355 aa19.8■□□□□ 0.76
RAB40C-207ENST00000563109 POMKQ9H5K3 350 aa19.8■□□□□ 0.76
RAB40C-207ENST00000563109 CNGB3Q9NQW8 809 aa19.8■□□□□ 0.76
RAB40C-207ENST00000563109 TLR8Q9NR97 1041 aaKnown RBP19.8■□□□□ 0.76
RAB40C-207ENST00000563109 CYTH4Q9UIA0 394 aa19.8■□□□□ 0.76
RAB40C-207ENST00000563109 USP3Q9Y6I4 520 aa19.8■□□□□ 0.76
RAB40C-207ENST00000563109 NCANO14594 1321 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 DENND4CQ5VZ89 1909 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 A0A1W2PRU2 124 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 FAM92AA1XBS5 289 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 E5RJQ4 531 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 PIK3R2O00459 728 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 SART1O43290 800 aaKnown RBP19.79■□□□□ 0.76
RAB40C-207ENST00000563109 USP17L7P0C7H9 530 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 RPL34P49207 117 aaKnown RBP19.79■□□□□ 0.76
RAB40C-207ENST00000563109 GSDMDP57764 484 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 CENPCQ03188 943 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 TFF2Q03403 129 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 SLC5A9Q2M3M2 681 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 PRSS36Q5K4E3 855 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.79■□□□□ 0.76
RAB40C-207ENST00000563109 SHKBP1Q8TBC3 707 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 CPA5Q8WXQ8 436 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 GOLGA1Q92805 767 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 PANX2Q96RD6 677 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 CPXM1Q96SM3 734 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 PCDHB18PQ96TA0 734 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 IL21Q9HBE4 155 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 GMIPQ9P107 970 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 NOTCH4Q99466 2003 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 BRWD1Q9NSI6 2320 aa19.79■□□□□ 0.76
RAB40C-207ENST00000563109 SSU72P8A0A1W2PR75 194 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 ABL1P00519 1130 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 F11P03951 625 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 PLEKP08567 350 aaPredicted RBP19.78■□□□□ 0.76
RAB40C-207ENST00000563109 DDX6P26196 483 aaKnown RBP eCLIP19.78■□□□□ 0.76
RAB40C-207ENST00000563109 CCR2P41597 374 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 PSEN1P49768 467 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 CDK17Q00537 523 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 PTPN20Q4JDL3 420 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 WDR59Q6PJI9 974 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 GAREM2Q75VX8 874 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 TMEM110Q86TL2 294 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 SCML4Q8N228 414 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 ING5Q8WYH8 240 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 IRGQQ8WZA9 623 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 TCEAL4Q96EI5 215 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 SLITRK6Q9H5Y7 841 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 ARHGAP20Q9P2F6 1191 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 ZMYM5Q9UJ78 669 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 REV3LO60673 3130 aa19.78■□□□□ 0.76
RAB40C-207ENST00000563109 DOCK6Q96HP0 2047 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 UNGP13051 313 aaPredicted RBP19.77■□□□□ 0.76
RAB40C-207ENST00000563109 GJA1P17302 382 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 CEBPBP17676 345 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 EIF4A3P38919 411 aaKnown RBP19.77■□□□□ 0.76
RAB40C-207ENST00000563109 DAOAP59103 153 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 CYP4F8P98187 520 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 TEAD2Q15562 447 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 SMAD2Q15796 467 aaKnown RBP19.77■□□□□ 0.76
RAB40C-207ENST00000563109 PM20D1Q6GTS8 502 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 TOGARAM2Q6ZUX3 1019 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 MON1AQ86VX9 555 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 ZDHHC17Q8IUH5 632 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 ITFG1Q8TB96 612 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 C18orf8Q96DM3 657 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 TRIM62Q9BVG3 475 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.77■□□□□ 0.765e-8■■■■□ 19.6
RAB40C-207ENST00000563109 STRIP2Q9ULQ0 834 aa19.77■□□□□ 0.76
RAB40C-207ENST00000563109 ANAPC1Q9H1A4 1944 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 FAM170AA1A519 330 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 ZNF840PA6NDX5 716 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 DDX3XO00571 662 aaKnown RBP eCLIP19.76■□□□□ 0.755e-7■■■■■ 34.5
RAB40C-207ENST00000563109 AKR1B10O60218 316 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 TADA3O75528 432 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 ERBB2P04626 1255 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 CALB1P05937 261 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 GBP2P32456 591 aaPredicted RBP19.76■□□□□ 0.75
RAB40C-207ENST00000563109 MRPS5P82675 430 aaKnown RBP19.76■□□□□ 0.75
RAB40C-207ENST00000563109 MAPK8IP2Q13387 824 aaPredicted RBP19.76■□□□□ 0.75
RAB40C-207ENST00000563109 GPR158Q5T848 1215 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 OR6B2Q6IFH4 312 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 ACAD10Q6JQN1 1059 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 MMS22LQ6ZRQ5 1243 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 OTOP3Q7RTS5 596 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 PHF13Q86YI8 300 aaPredicted RBP19.76■□□□□ 0.75
RAB40C-207ENST00000563109 SCUBE3Q8IX30 993 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms