RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 RAB27AP51159 221 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 NLRP11P59045 1033 aaKnown RBP6.57□□□□□ -1.36
TCF4-213ENST00000562543 RPL6Q02878 288 aaKnown RBP6.57□□□□□ -1.36
TCF4-213ENST00000562543 RAB33AQ14088 237 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 UBE3CQ15386 1083 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 TESK1Q15569 626 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 PSMD5Q16401 504 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 QRICH1Q2TAL8 776 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 FHL5Q5TD97 284 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 CCDC81Q6ZN84 652 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 SYDE1Q6ZW31 735 aaPredicted RBP6.57□□□□□ -1.36
TCF4-213ENST00000562543 PLPPR4Q7Z2D5 763 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 DEFB119Q8N690 84 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 PIGOQ8TEQ8 1089 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 CITED4Q96RK1 184 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 TMEM47Q9BQJ4 181 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 GAREM1Q9H706 876 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 RSAD1Q9HA92 442 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 RTEL1Q9NZ71 1219 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 RTTNQ86VV8 2226 aa6.57□□□□□ -1.36
TCF4-213ENST00000562543 CNTNAP2Q9UHC6 1331 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 A0A087X0B3 334 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 TSPY2A6NKD2 308 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 PAGE1O75459 146 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 RFPL3O75679 317 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 MATKP42679 507 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 ERVPABLB-1P60509 514 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 SPIRE1Q08AE8 756 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 BYSLQ13895 437 aaKnown RBP6.56□□□□□ -1.36
TCF4-213ENST00000562543 PTPAQ15257 358 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 CRY1Q16526 586 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 NAIF1Q69YI7 327 aaPredicted RBP6.56□□□□□ -1.36
TCF4-213ENST00000562543 TWF2Q6IBS0 349 aaKnown RBP6.56□□□□□ -1.36
TCF4-213ENST00000562543 SPNS3Q6ZMD2 512 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 PTRH1Q86Y79 214 aaKnown RBP6.56□□□□□ -1.36
TCF4-213ENST00000562543 SAMD3Q8N6K7 520 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 ENGASEQ8NFI3 743 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 STRBPQ96SI9 672 aaKnown RBP6.56□□□□□ -1.36
TCF4-213ENST00000562543 FAM124BQ9H5Z6 455 aaPredicted RBP6.56□□□□□ -1.36
TCF4-213ENST00000562543 AZI2Q9H6S1 392 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 CARS2Q9HA77 564 aaKnown RBP6.56□□□□□ -1.36
TCF4-213ENST00000562543 ATP13A1Q9HD20 1204 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 HPS4Q9NQG7 708 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 C19orf73Q9NVV2 129 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 OBP2AQ9NY56 170 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 FAM53CQ9NYF3 392 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 DONSONQ9NYP3 566 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 ADAM28Q9UKQ2 775 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 MMP17Q9ULZ9 603 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.56□□□□□ -1.36
TCF4-213ENST00000562543 COL6A5A8TX70 2615 aa6.56□□□□□ -1.36
TCF4-213ENST00000562543 KNL1Q8NG31 2342 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 OTOL1A6NHN0 477 aaPredicted RBP6.55□□□□□ -1.36
TCF4-213ENST00000562543 FBXO24O75426 580 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 ALDH1A2O94788 518 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 KRT1P04264 644 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 C1SP09871 688 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 TOP1P11387 765 aaKnown RBP6.55□□□□□ -1.36
TCF4-213ENST00000562543 GJA1P17302 382 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 BMP6P22004 513 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 GRK6P43250 576 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 GALK1P51570 392 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 BNC1Q01954 994 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 TEAD2Q15562 447 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.55□□□□□ -1.36
TCF4-213ENST00000562543 MPZL3Q6UWV2 235 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 SLC36A4Q6YBV0 504 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 LRRC56Q8IYG6 542 aaPredicted RBP6.55□□□□□ -1.36
TCF4-213ENST00000562543 LINC01465Q8N7H1 131 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 CCER1Q8TC90 406 aaPredicted RBP6.55□□□□□ -1.36
TCF4-213ENST00000562543 USP33Q8TEY7 942 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 PGBD4Q96DM1 585 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 HSPA12BQ96MM6 686 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 P2RY13Q9BPV8 354 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 GPR88Q9GZN0 384 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 UBA5Q9GZZ9 404 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 GEMIN8Q9NWZ8 242 aaKnown RBP6.55□□□□□ -1.36
TCF4-213ENST00000562543 PPP4R2Q9NY27 417 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 ANAPC2Q9UJX6 822 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 TACC2O95359 2948 aa6.55□□□□□ -1.36
TCF4-213ENST00000562543 ZFC3H1O60293 1989 aaKnown RBP6.55□□□□□ -1.36
TCF4-213ENST00000562543 SF3B1O75533 1304 aaKnown RBP eCLIP6.54□□□□□ -1.362e-6■■■■■ 96.1
TCF4-213ENST00000562543 CUBNO60494 3623 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 HBP1O60381 514 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 SEMA7AO75326 666 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 DDAH2O95865 285 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 GOLGA8HP0CJ92 632 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 GNSP15586 552 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 U2AF2P26368 475 aaKnown RBP eCLIP6.54□□□□□ -1.36
TCF4-213ENST00000562543 UQCRFS1P47985 274 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 TDO2P48775 406 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 SLC26A2P50443 739 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 GPC3P51654 580 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 STAT5BP51692 787 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 CLCN3P51790 818 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 HNRNPUQ00839 825 aaKnown RBP eCLIP6.54□□□□□ -1.36
TCF4-213ENST00000562543 OS9Q13438 667 aaPredicted RBP6.54□□□□□ -1.36
TCF4-213ENST00000562543 HLA-BQ31612 363 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 GPATCH4Q5T3I0 446 aaKnown RBP6.54□□□□□ -1.36
TCF4-213ENST00000562543 CYP4A22Q5TCH4 519 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms