RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 SH2D5Q6ZV89 423 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 SLC7A3Q8WY07 619 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 GATA6Q92908 595 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 TRAPPC9Q96Q05 1148 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 WWP1Q9H0M0 922 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 PORCNQ9H237 461 aa14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 ZNF395Q9H8N7 513 aaPredicted RBP14.56□□□□□ -0.08
VPS9D1-202ENST00000561976 H7C0C1 242 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 KLF11O14901 512 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 SPAG6O75602 509 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 RNF8O76064 485 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 SNRPAP09012 282 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 ATP5OP48047 213 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 RAB27AP51159 221 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 AQP5P55064 265 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 C1orf146Q5VVC0 180 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 NET1Q7Z628 596 aaPredicted RBP14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 CCNJLQ8IV13 435 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 NUDCD3Q8IVD9 361 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 RPAP3Q9H6T3 665 aaPredicted RBP14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 RAB6BQ9NRW1 208 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 NDE1Q9NXR1 346 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 ZNF646O15015 1829 aaPredicted RBP14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 F8W8V4 182 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 RGS20O76081 388 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 IL1BP01584 269 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 GCLCP48506 637 aaPredicted RBP14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 YWHAEP62258 255 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 AP2B1P63010 937 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 TFAMQ00059 246 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 LGSNQ5TDP6 509 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 FOXB2Q5VYV0 432 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 ULK2Q8IYT8 1036 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 NSUN6Q8TEA1 469 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 CNKSR2Q8WXI2 1034 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 ATG4CQ96DT6 458 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 IFT43Q96FT9 208 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 WNK4Q96J92 1243 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 PDP2Q9P2J9 529 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 NXF1Q9UBU9 619 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 TAGLN3Q9UI15 199 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 PCDHGC3Q9UN70 934 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 PLLPQ9Y342 182 aa14.55□□□□□ -0.08
VPS9D1-202ENST00000561976 PLSCR1O15162 318 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 SUPT20HL2P0C7V6 817 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 MIPP30301 263 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 CDH5P33151 784 aaPredicted RBP14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 DSG1Q02413 1049 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 MMRN1Q13201 1228 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 BMPR2Q13873 1038 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 ZNF699Q32M78 642 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 TRMT5Q32P41 509 aaKnown RBP14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 SUPT20HL1Q3ZLR7 823 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 FAM91A1Q658Y4 838 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 CRLF3Q8IUI8 442 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 WDR49Q8IV35 697 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 BRSK2Q8IWQ3 736 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 C7orf26Q96N11 449 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 PANX3Q96QZ0 392 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 ZC3H7BQ9UGR2 993 aaKnown RBP14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 ADGRA2Q96PE1 1338 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 KAT6AQ92794 2004 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 CAPN14A8MX76 684 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 CYB561D2O14569 222 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 TM7SF2O76062 418 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 STIP1P31948 543 aaKnown RBP14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 AP3M2P53677 418 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 HIRAP54198 1017 aaPredicted RBP14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 MTMR2Q13614 643 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 GSTA3Q16772 222 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 DUOXA2Q1HG44 320 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 DNAL1Q4LDG9 190 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 SLC25A41Q8N5S1 370 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 CEP120Q8N960 986 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 ZNF302Q9NR11 478 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 ETAA1Q9NY74 926 aa14.54□□□□□ -0.08
VPS9D1-202ENST00000561976 CXorf49A8MYA2 514 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 VWA5AO00534 786 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 TAZQ16635 292 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 FAXCQ5TGI0 409 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 C1orf228Q6PIY5 440 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 FAM83AQ86UY5 434 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 MTBPQ96DY7 904 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 RSAD1Q9HA92 442 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 CYTH4Q9UIA0 394 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 USP18Q9UMW8 372 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 ARID2Q68CP9 1835 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 DCAF8L1A6NGE4 600 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 TTLL13PA6NNM8 815 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 OATP04181 439 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 LYNP07948 512 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 CDH6P55285 790 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 ORC1Q13415 861 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 KCNJ11Q14654 390 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 SNRNP48Q6IEG0 339 aaKnown RBP14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 ZFAND2BQ8WV99 257 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 CDHR1Q96JP9 859 aa14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 NR1H4Q96RI1 486 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-202ENST00000561976 CPXM1Q96SM3 734 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms