RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 DENND4CQ5VZ89 1909 aa10.91□□□□□ -0.66
CLK3-205ENST00000561673 OBSL1O75147 1896 aa10.91□□□□□ -0.66
CLK3-205ENST00000561673 KIF26AQ9ULI4 1882 aaPredicted RBP10.9□□□□□ -0.66
CLK3-205ENST00000561673 SCAMP3O14828 347 aaKnown RBP10.9□□□□□ -0.66
CLK3-205ENST00000561673 COCHO43405 550 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 ATG13O75143 517 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 RNF40O75150 1001 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 NFATC1O95644 943 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 GTF2H1P32780 548 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 PGFP49763 221 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 MAP3K7CLP57077 242 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 INCA1Q0VD86 236 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 SRSF5Q13243 272 aaKnown RBP10.9□□□□□ -0.66
CLK3-205ENST00000561673 HECTD3Q5T447 861 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 FILIP1Q7Z7B0 1213 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 KIAA1958Q8N8K9 716 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 PDZD8Q8NEN9 1154 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 SPATA20Q8TB22 786 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 WHAMMQ8TF30 809 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 EZH1Q92800 747 aaPredicted RBP10.9□□□□□ -0.66
CLK3-205ENST00000561673 SEMA4DQ92854 862 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 ERCC4Q92889 916 aaPredicted RBP10.9□□□□□ -0.66
CLK3-205ENST00000561673 SECISBP2LQ93073 1101 aaKnown RBP10.9□□□□□ -0.66
CLK3-205ENST00000561673 EXOC4Q96A65 974 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 GSDMAQ96QA5 445 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 HNRNPABQ99729 332 aaKnown RBP10.9□□□□□ -0.66
CLK3-205ENST00000561673 IMPG2Q9BZV3 1241 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 CCSER2Q9H7U1 834 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 CYP3A43Q9HB55 503 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 FAM49BQ9NUQ9 324 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 RMND1Q9NWS8 449 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 COMMD8Q9NX08 183 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 GMIPQ9P107 970 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 CFAP97Q9P2B7 532 aa10.9□□□□□ -0.66
CLK3-205ENST00000561673 OTOGLQ3ZCN5 2332 aa10.9□□□□□ -0.67
CLK3-205ENST00000561673 PTPRDP23468 1912 aa10.9□□□□□ -0.67
CLK3-205ENST00000561673 GREB1Q4ZG55 1949 aa10.9□□□□□ -0.67
CLK3-205ENST00000561673 FAM92AA1XBS5 289 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 CETN3O15182 167 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 CILPO75339 1184 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 ZDHHC11BP0C7U3 371 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 EPB41P11171 864 aaKnown RBP10.89□□□□□ -0.67
CLK3-205ENST00000561673 MBL2P11226 248 aaPredicted RBP10.89□□□□□ -0.67
CLK3-205ENST00000561673 CD58P19256 250 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 TGM1P22735 817 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 ADORA2BP29275 332 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 CNR2P34972 360 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 PXNP49023 591 aaPredicted RBP10.89□□□□□ -0.67
CLK3-205ENST00000561673 SIM2Q14190 667 aaPredicted RBP10.89□□□□□ -0.67
CLK3-205ENST00000561673 DHCR24Q15392 516 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 GAB4Q2WGN9 574 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 FBXO43Q4G163 708 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 COBLL1Q53SF7 1204 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 ZNF658Q5TYW1 1059 aaPredicted RBP10.89□□□□□ -0.67
CLK3-205ENST00000561673 KRT39Q6A163 491 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 ANKRD40Q6AI12 368 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 PRR23BQ6ZRT6 265 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 WDR5BQ86VZ2 330 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 RMDN1Q96DB5 314 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 CYFIP2Q96F07 1278 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 ZFRQ96KR1 1074 aaKnown RBP10.89□□□□□ -0.67
CLK3-205ENST00000561673 NT5C1AQ9BXI3 368 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 NIF3L1Q9GZT8 377 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 RAB23Q9ULC3 237 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 SLC8A2Q9UPR5 921 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 PCDHA5Q9Y5H7 936 aa10.89□□□□□ -0.67
CLK3-205ENST00000561673 ANAPC1Q9H1A4 1944 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 HHLA1C9JL84 531 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 K7EQS6 105 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 SLC9A3R1O14745 358 aaPredicted RBP10.88□□□□□ -0.67
CLK3-205ENST00000561673 SMC2O95347 1197 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 TBX18O95935 607 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 CYP17A1P05093 508 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 FAM200BP0CF97 657 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 LAMA1P25391 3075 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 OPRD1P41143 372 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 TUBP50607 506 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 PMS1P54277 932 aaKnown RBP10.88□□□□□ -0.67
CLK3-205ENST00000561673 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
CLK3-205ENST00000561673 LAIR1Q6GTX8 287 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 RHBDF2Q6PJF5 856 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 CLEC20AQ6ZU45 233 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 GPRIN1Q7Z2K8 1008 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 DDX42Q86XP3 938 aaKnown RBP eCLIP10.88□□□□□ -0.67
CLK3-205ENST00000561673 ZC3H3Q8IXZ2 948 aaKnown RBP10.88□□□□□ -0.67
CLK3-205ENST00000561673 GPR161Q8N6U8 529 aaKnown RBP10.88□□□□□ -0.67
CLK3-205ENST00000561673 CCDC150Q8NCX0 1101 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 FBXL13Q8NEE6 735 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 RPLP0P6Q8NHW5 317 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 SMARCE1Q969G3 411 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 TIGD1Q96MW7 591 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 FBXO44Q9H4M3 255 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 RAB20Q9NX57 234 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 GMEB2Q9UKD1 530 aa10.88□□□□□ -0.67
CLK3-205ENST00000561673 ZNF638Q14966 1978 aaKnown RBP10.87□□□□□ -0.67
CLK3-205ENST00000561673 E2F8A0AVK6 867 aa10.87□□□□□ -0.67
CLK3-205ENST00000561673 ANTXRLA6NF34 631 aa10.87□□□□□ -0.67
CLK3-205ENST00000561673 CYP26A1O43174 497 aa10.87□□□□□ -0.67
CLK3-205ENST00000561673 STX10O60499 249 aa10.87□□□□□ -0.67
CLK3-205ENST00000561673 TLR5O60602 858 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms