RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 CLASP2O75122 1294 aaKnown RBP12.28□□□□□ -0.44
HERC1-214ENST00000561400 KRT38O76015 456 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 SEC24AO95486 1093 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 MMEP08473 750 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 SPATA31D3P0C874 917 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 ATF2P15336 505 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 BDNFP23560 247 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 CYP2F1P24903 491 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 ABL2P42684 1182 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 RANBP1P43487 201 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 KLHL30Q0D2K2 578 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 DUSP4Q13115 394 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 ELF2Q15723 593 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 NFE2Q16621 373 aaPredicted RBP12.28□□□□□ -0.44
HERC1-214ENST00000561400 MEA1Q16626 185 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 PTPROQ16827 1216 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 CFAP221Q4G0U5 840 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 LCLAT1Q6UWP7 414 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 SPATA31D4Q6ZUB0 917 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 ZNF571Q7Z3V5 609 aaPredicted RBP12.28□□□□□ -0.44
HERC1-214ENST00000561400 FAM35AQ86V20 835 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 FAM81AQ8TBF8 368 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 DNAI2Q9GZS0 605 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 AFF4Q9UHB7 1163 aaKnown RBP12.28□□□□□ -0.44
HERC1-214ENST00000561400 TPX2Q9ULW0 747 aaKnown RBP12.28□□□□□ -0.44
HERC1-214ENST00000561400 SLC27A5Q9Y2P5 690 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 GREB1Q4ZG55 1949 aa12.28□□□□□ -0.44
HERC1-214ENST00000561400 BEST1O76090 585 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 STK10O94804 968 aaKnown RBP12.27□□□□□ -0.44
HERC1-214ENST00000561400 SERPING1P05155 500 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 CLCN4P51793 760 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 FMO1Q01740 532 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 GOLGA7BQ2TAP0 167 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 PKDCCQ504Y2 493 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 TPGS2Q68CL5 300 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 CCDC70Q6NSX1 233 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 C4orf50Q6ZRC1 276 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 Q7L0L9 218 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 TMEM110Q86TL2 294 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 SPATA2LQ8IUW3 424 aaPredicted RBP12.27□□□□□ -0.44
HERC1-214ENST00000561400 UBA3Q8TBC4 463 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 PANX2Q96RD6 677 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 MED10Q9BTT4 135 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 PHACTR1Q9C0D0 580 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 PCDHB5Q9Y5E4 795 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 MRFAP1Q9Y605 127 aa12.27□□□□□ -0.44
HERC1-214ENST00000561400 E2F6O75461 281 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 SOAT2O75908 522 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 MICAL2O94851 1124 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 NRIP1P48552 1158 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 CDR2Q01850 454 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 SMARCB1Q12824 385 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 MPP3Q13368 585 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 TSR1Q2NL82 804 aaKnown RBP12.27□□□□□ -0.45
HERC1-214ENST00000561400 TDRD12Q587J7 1177 aaKnown RBP12.27□□□□□ -0.45
HERC1-214ENST00000561400 DENND1BQ6P3S1 775 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 SDCCAG8Q86SQ7 713 aaPredicted RBP12.27□□□□□ -0.45
HERC1-214ENST00000561400 KIAA1328Q86T90 577 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 ANKRD52Q8NB46 1076 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 SPPL2BQ8TCT7 592 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 FUBP3Q96I24 572 aaKnown RBP eCLIP12.27□□□□□ -0.45
HERC1-214ENST00000561400 KCNK16Q96T55 309 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 AGPAT1Q99943 283 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 TLE6Q9H808 572 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 PCDHGC3Q9UN70 934 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 DOCK6Q96HP0 2047 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 ZNF638Q14966 1978 aaKnown RBP12.27□□□□□ -0.45
HERC1-214ENST00000561400 PATJQ8NI35 1801 aa12.27□□□□□ -0.45
HERC1-214ENST00000561400 FAM170AA1A519 330 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 MED7O43513 233 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 STILQ15468 1287 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 DUSP6Q16828 381 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 WLSQ5T9L3 541 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 CLEC20AQ6ZU45 233 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 CCDC80Q76M96 950 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 ZNF677Q86XU0 584 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 PASD1Q8IV76 773 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 PARP9Q8IXQ6 854 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 WDTC1Q8N5D0 677 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 ZMIZ2Q8NF64 920 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
HERC1-214ENST00000561400 SLC22A17Q8WUG5 538 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 PCDHB18PQ96TA0 734 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 SMOQ99835 787 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 KCNF1Q9H3M0 494 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 KRT82Q9NSB4 513 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 ZNHIT6Q9NWK9 470 aaKnown RBP12.26□□□□□ -0.45
HERC1-214ENST00000561400 HCFC2Q9Y5Z7 792 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 MTCH2Q9Y6C9 303 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 M0QYV0 167 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 GLUD1P00367 558 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 EPCAMP16422 314 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 FECHP22830 423 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 OAS2P29728 719 aaKnown RBP12.26□□□□□ -0.45
HERC1-214ENST00000561400 GPD2P43304 727 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 GSDMDP57764 484 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 TCEAL5Q5H9L2 206 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 GPR153Q6NV75 609 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 TMEM139Q8IV31 216 aa12.26□□□□□ -0.45
HERC1-214ENST00000561400 C2orf15Q8WU43 125 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms