RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 CNNM4Q6P4Q7 775 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 C12orf40Q86WS4 652 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 TTC30AQ86WT1 665 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 SYT12Q8IV01 421 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 SFTPA1Q8IWL2 248 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 PHTF2Q8N3S3 785 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 B3GALNT2Q8NCR0 500 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 HPS3Q969F9 1004 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 FNBP1Q96RU3 617 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 TMEM121BQ9BXQ6 578 aaPredicted RBP12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 ZNF518BQ9C0D4 1074 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 DPEP3Q9H4B8 488 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 AGPAT3Q9NRZ7 376 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 TMEM30AQ9NV96 361 aa12.58□□□□□ -0.4
CARMIL3-204ENST00000561354 A8MXQ7 604 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 SCAMP3O14828 347 aaKnown RBP12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 MAP3K13O43283 966 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 COCHO43405 550 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 ADAM23O75077 832 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 ATICP31939 592 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 HOXD12P35452 270 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 NASPP49321 788 aaPredicted RBP12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 CYP24A1Q07973 514 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 PREPLQ4J6C6 727 aaPredicted RBP12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 TRIM61Q5EBN2 209 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 FAM26FQ5R3K3 315 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 LY6G5CQ5SRR4 150 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 PEAR1Q5VY43 1037 aaPredicted RBP12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 SLC23A3Q6PIS1 610 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 ETFBKMTQ8IXQ9 262 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 XXYLT1Q8NBI6 393 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 RDH13Q8NBN7 331 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 RLN3Q8WXF3 142 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 CCDC127Q96BQ5 260 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 ZFRQ96KR1 1074 aaKnown RBP12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 NUSAP1Q9BXS6 441 aaKnown RBP12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 B3GNT5Q9BYG0 378 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 ADAM33Q9BZ11 813 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 XYLT2Q9H1B5 865 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 ZSCAN16Q9H4T2 348 aaPredicted RBP12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 VRTNQ9H8Y1 702 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 TMEM74BQ9NUR3 256 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 IL37Q9NZH6 218 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 BCCIPQ9P287 314 aaKnown RBP eCLIP12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 MBD1Q9UIS9 605 aaPredicted RBP12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 MTMR6Q9Y217 621 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 UBE4BO95155 1302 aa12.57□□□□□ -0.4
CARMIL3-204ENST00000561354 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 TMEM8BA6NDV4 472 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 CLDN5O00501 218 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 HOXC11O43248 304 aaPredicted RBP12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 PTGER3P43115 390 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 TUBP50607 506 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 MYL6P60660 151 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 IFRD2Q12894 506 aaPredicted RBP12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 TRPC3Q13507 836 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 UAP1L1Q3KQV9 507 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 HECTD3Q5T447 861 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 BTBD8Q5XKL5 378 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 TRMT11Q7Z4G4 463 aaKnown RBP12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 TMEFF1Q8IYR6 380 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 FRMD1Q8N878 549 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 LINC00301Q8NCQ3 95 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 SCFD1Q8WVM8 642 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 HMGB4Q8WW32 186 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 ZNF516Q92618 1163 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 FBXO32Q969P5 355 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 SYAP1Q96A49 352 aaPredicted RBP12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 INTS4Q96HW7 963 aaKnown RBP12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 KCNK16Q96T55 309 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 GZF1Q9H116 711 aaPredicted RBP12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 SLC32A1Q9H598 525 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 COMMD8Q9NX08 183 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 CGNQ9P2M7 1197 aaKnown RBP12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 PILRBQ9UKJ0 227 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 ZMIZ1Q9ULJ6 1067 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 PLXND1Q9Y4D7 1925 aa12.56□□□□□ -0.4
CARMIL3-204ENST00000561354 TNRC6BQ9UPQ9 1833 aaKnown RBP12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 MYOFQ9NZM1 2061 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 ZFHX4Q86UP3 3567 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 TCRBV21S2A2A0A5A6 115 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 FAM92AA1XBS5 289 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 TBC1D3BA6NDS4 549 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 UPK3BL1B0FP48 263 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 UPK3BL2E5RIL1 263 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 CLIC2O15247 247 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 PPP6R2O75170 966 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 TULP3O75386 442 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 ZDHHC11BP0C7U3 371 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 ENGP17813 658 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 CYP2J2P51589 502 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 ASIC1P78348 528 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 KDSRQ06136 332 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 EHHADHQ08426 723 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 STK38Q15208 465 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 LYSMD4Q5XG99 296 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 NUDT18Q6ZVK8 323 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 C12orf56Q8IXR9 622 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 PGBD3Q8N328 593 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 IQUBQ8NA54 791 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms