RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 ATP8B3O60423 1300 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 MYH10P35580 1976 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 SOBPA7XYQ1 873 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 K7ESF4 209 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 PSMA7O14818 248 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 MDM4O15151 490 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 TBX18O95935 607 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 CYP17A1P05093 508 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 FAM200BP0CF97 657 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 TCF3P15923 654 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 OPRD1P41143 372 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 FMO5P49326 533 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 MLLT6P55198 1093 aaPredicted RBP13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 SRSF5Q13243 272 aaKnown RBP13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 TMEM196Q5HYL7 178 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 FILIP1Q7Z7B0 1213 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 SCD5Q86SK9 330 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 TTC30AQ86WT1 665 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 ARHGEF19Q8IW93 802 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 LMO3Q8TAP4 145 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 CYFIP2Q96F07 1278 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 CCDC34Q96HJ3 373 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 DHTKD1Q96HY7 919 aaPredicted RBP13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 NELL2Q99435 816 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 ARMCX3Q9UH62 379 aaPredicted RBP13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 ZMYM5Q9UJ78 669 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 NUDT5Q9UKK9 219 aa13.4□□□□□ -0.26
CHRNA3-208ENST00000561128 GREM1O60565 184 aa13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 UBE2HP62256 183 aa13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 APBA1Q02410 837 aa13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 CUL2Q13617 745 aa13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 PDGFRLQ15198 375 aa13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 BHLHA9Q7RTU4 235 aa13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 SUMF1Q8NBK3 374 aa13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 ZBTB44Q8NCP5 570 aa13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 NDRG1Q92597 394 aaKnown RBP13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 NKD2Q969F2 451 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 MSANTD3Q96H12 275 aa13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 CEP63Q96MT8 703 aa13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 SLITRK1Q96PX8 696 aa13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 IRF2BPLQ9H1B7 796 aa13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 THG1LQ9NWX6 298 aaKnown RBP13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 FBXO4Q9UKT5 387 aa13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 ZFHX2Q9C0A1 2572 aaPredicted RBP13.39□□□□□ -0.27
CHRNA3-208ENST00000561128 DMDP11532 3685 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 A0A1W2PQH9 124 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 RNF225M0QZC1 329 aaPredicted RBP13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 TRDMT1O14717 391 aaKnown RBP13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 LILRB5O75023 590 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 GABBR2O75899 941 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 RTN3O95197 1032 aaPredicted RBP13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 IRF1P10914 325 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 MBL2P11226 248 aaPredicted RBP13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 ACO1P21399 889 aaKnown RBP13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 MAGEA9P43362 315 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 IFNAR2P48551 515 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 GALK1P51570 392 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 PAK1Q13153 545 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 CCDC40Q4G0X9 1142 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 SNX30Q5VWJ9 437 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 CC2D1AQ6P1N0 951 aaPredicted RBP13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 TRIM59Q8IWR1 403 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 DCLK2Q8N568 766 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 TFAP2BQ92481 460 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 KIAA1468Q9P260 1216 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 HOOK1Q9UJC3 728 aaKnown RBP13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 EML5Q05BV3 1969 aa13.38□□□□□ -0.27
CHRNA3-208ENST00000561128 CHURC1-FNTBB4DL54 471 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 NCAM2O15394 837 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 TLR5O60602 858 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 RNF40O75150 1001 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 PXNP49023 591 aaPredicted RBP13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 FNTBP49356 437 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 GOLGA7BQ2TAP0 167 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 ZNF528Q3MIS6 628 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 IRF2BP1Q8IU81 584 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 BBS7Q8IWZ6 715 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 CPA6Q8N4T0 437 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 OVCA2Q8WZ82 227 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 ATP2A3Q93084 1043 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 TMEM176AQ96HP8 235 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 HEXIM2Q96MH2 286 aaKnown RBP13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 KREMEN1Q96MU8 473 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 DUSP16Q9BY84 665 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 CLSTN2Q9H4D0 955 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 AJAP1Q9UKB5 411 aaPredicted RBP13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 SCML2Q9UQR0 700 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 GPR179Q6PRD1 2367 aa13.37□□□□□ -0.27
CHRNA3-208ENST00000561128 STX10O60499 249 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 PFKLP17858 780 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 SLC6A11P48066 632 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 PPP3CCP48454 512 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 KIF11P52732 1056 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 STIM1Q13586 685 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 LRRC32Q14392 662 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 DHCR24Q15392 516 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 LPAL2Q16609 132 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 DPCR1Q3MIW9 517 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 HECTD3Q5T447 861 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 ARHGAP17Q68EM7 881 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms