RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 KIR2DL1P43626 348 aaPredicted RBP12.83□□□□□ -0.36
MARK3-221ENST00000560603 SLC6A11P48066 632 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 CASP5P51878 434 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 USP46P62068 366 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 SIM1P81133 766 aaPredicted RBP12.83□□□□□ -0.36
MARK3-221ENST00000560603 GAD2Q05329 585 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 GFPT1Q06210 699 aaPredicted RBP12.83□□□□□ -0.36
MARK3-221ENST00000560603 TAF10Q12962 218 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 COL9A2Q14055 689 aaPredicted RBP12.83□□□□□ -0.36
MARK3-221ENST00000560603 HNRNPDQ14103 355 aaKnown RBP12.83□□□□□ -0.36
MARK3-221ENST00000560603 C8orf34Q49A92 452 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 MDH1BQ5I0G3 518 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 KIAA1211LQ6NV74 962 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 USP49Q70CQ1 688 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 WDR49Q8IV35 697 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 CCDC65Q8IXS2 484 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 OR5B17Q8NGF7 314 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 OVCA2Q8WZ82 227 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 DEC1Q9P2X7 70 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 PILRBQ9UKJ0 227 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 SRPRBQ9Y5M8 271 aaKnown RBP12.83□□□□□ -0.36
MARK3-221ENST00000560603 ITPR1Q14643 2758 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 ATP8B3O60423 1300 aa12.83□□□□□ -0.36
MARK3-221ENST00000560603 FRMD3A2A2Y4 597 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 HYAL3O43820 417 aaPredicted RBP12.82□□□□□ -0.36
MARK3-221ENST00000560603 OPHN1O60890 802 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 TACC1O75410 805 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 HNRNPLP14866 589 aaKnown RBP eCLIP12.82□□□□□ -0.36
MARK3-221ENST00000560603 YWHAQP27348 245 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 STAT6P42226 847 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 TNNC1P63316 161 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 RPL6Q02878 288 aaKnown RBP12.82□□□□□ -0.36
MARK3-221ENST00000560603 KDSRQ06136 332 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 SEMA3BQ13214 749 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 MAP7D1Q3KQU3 841 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 LY6G5CQ5SRR4 150 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 PEAR1Q5VY43 1037 aaPredicted RBP12.82□□□□□ -0.36
MARK3-221ENST00000560603 PIP4P1Q86T03 277 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 NUP93Q8N1F7 819 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 OR6B3Q8NGW1 331 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 FAM84AQ96KN4 292 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 GTPBP2Q9BX10 602 aaKnown RBP12.82□□□□□ -0.36
MARK3-221ENST00000560603 TMEM74BQ9NUR3 256 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 MBD1Q9UIS9 605 aaPredicted RBP12.82□□□□□ -0.36
MARK3-221ENST00000560603 SH3BP1Q9Y3L3 701 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 PTPRDP23468 1912 aa12.82□□□□□ -0.36
MARK3-221ENST00000560603 SPAARA0A1B0GVQ0 90 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 VPS37CA5D8V6 355 aaPredicted RBP12.81□□□□□ -0.36
MARK3-221ENST00000560603 SCAMP3O14828 347 aaKnown RBP12.81□□□□□ -0.36
MARK3-221ENST00000560603 HOXC11O43248 304 aaPredicted RBP12.81□□□□□ -0.36
MARK3-221ENST00000560603 ADAM23O75077 832 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 ZNF217O75362 1048 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 SYPP08247 313 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 SERPINF2P08697 491 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 PTPN1P18031 435 aaKnown RBP12.81□□□□□ -0.36
MARK3-221ENST00000560603 TNNI1P19237 187 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 PDCP20941 246 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 ITPKAP23677 461 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 ACAP1Q15027 740 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 ZNF423Q2M1K9 1284 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 HECTD3Q5T447 861 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 EMC10Q5UCC4 262 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 SCARA3Q6AZY7 606 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 SDE2Q6IQ49 451 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 TRAPPC11Q7Z392 1133 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 C12orf40Q86WS4 652 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 ZNF513Q8N8E2 541 aaPredicted RBP12.81□□□□□ -0.36
MARK3-221ENST00000560603 FBXO32Q969P5 355 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 LRRC27Q9C0I9 530 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 UPF2Q9HAU5 1272 aaKnown RBP12.81□□□□□ -0.36
MARK3-221ENST00000560603 FBXO2Q9UK22 296 aaPredicted RBP12.81□□□□□ -0.36
MARK3-221ENST00000560603 LHX6Q9UPM6 363 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 CLIC4Q9Y696 253 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 ATXN2Q99700 1313 aaKnown RBP12.81□□□□□ -0.36
MARK3-221ENST00000560603 MYOFQ9NZM1 2061 aa12.81□□□□□ -0.36
MARK3-221ENST00000560603 WDFY3Q8IZQ1 3526 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 PLXND1Q9Y4D7 1925 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 FREM2Q5SZK8 3169 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 ANTXRLA6NF34 631 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 A8MXQ7 604 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 DLATP10515 647 aaKnown RBP12.8□□□□□ -0.36
MARK3-221ENST00000560603 NTSR1P30989 418 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 ZNF33AQ06730 810 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 MESP2Q0VG99 397 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 IFRD2Q12894 506 aaPredicted RBP12.8□□□□□ -0.36
MARK3-221ENST00000560603 TRPC3Q13507 836 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 WDR72Q3MJ13 1102 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 LRSAM1Q6UWE0 723 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 CBWD2Q8IUF1 395 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 SFTPA1Q8IWL2 248 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 B3GALNT2Q8NCR0 500 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 DUSP9Q99956 384 aaKnown RBP12.8□□□□□ -0.36
MARK3-221ENST00000560603 MRPL45Q9BRJ2 306 aaKnown RBP12.8□□□□□ -0.36
MARK3-221ENST00000560603 ZNF518BQ9C0D4 1074 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 NACA2Q9H009 215 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 HSPBP1Q9NZL4 362 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 ACACAQ13085 2346 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 PTPRJQ12913 1337 aa12.8□□□□□ -0.36
MARK3-221ENST00000560603 EIF3DO15371 548 aaKnown RBP eCLIP12.79□□□□□ -0.36
MARK3-221ENST00000560603 TULP3O75386 442 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms