RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 ZNF252P-AS1Q0IIN9 211 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 HADHQ16836 314 aaKnown RBP9.03□□□□□ -0.96
TRAF3-209ENST00000560463 CCDC142Q17RM4 750 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 CCDC181Q5TID7 509 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 TPGS2Q68CL5 300 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 PM20D1Q6GTS8 502 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 CC2D1AQ6P1N0 951 aaPredicted RBP9.03□□□□□ -0.96
TRAF3-209ENST00000560463 BEND5Q7L4P6 421 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 CREG2Q8IUH2 290 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 RASGEF1CQ8N431 466 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 MYRIPQ8NFW9 859 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 ACTRT1Q8TDG2 376 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 RXFP2Q8WXD0 754 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 RIN2Q8WYP3 895 aaPredicted RBP9.03□□□□□ -0.96
TRAF3-209ENST00000560463 GOLGA1Q92805 767 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 B3GALT6Q96L58 329 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 NAP1L3Q99457 506 aaPredicted RBP9.03□□□□□ -0.96
TRAF3-209ENST00000560463 DDX23Q9BUQ8 820 aaKnown RBP9.03□□□□□ -0.96
TRAF3-209ENST00000560463 VN1R3Q9BXE9 311 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 FBXO44Q9H4M3 255 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 POPDC2Q9HBU9 364 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 TMEM30AQ9NV96 361 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 DDX56Q9NY93 547 aaKnown RBP9.03□□□□□ -0.96
TRAF3-209ENST00000560463 ABI2Q9NYB9 513 aaPredicted RBP9.03□□□□□ -0.96
TRAF3-209ENST00000560463 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.03□□□□□ -0.96
TRAF3-209ENST00000560463 FNIP2Q9P278 1114 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 ZMYND8Q9ULU4 1186 aaPredicted RBP9.03□□□□□ -0.96
TRAF3-209ENST00000560463 LZTS1Q9Y250 596 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 CDY1Q9Y6F8 540 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 USP3Q9Y6I4 520 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 TRANK1O15050 2925 aa9.03□□□□□ -0.96
TRAF3-209ENST00000560463 NUP210Q8TEM1 1887 aaPredicted RBP9.02□□□□□ -0.96
TRAF3-209ENST00000560463 WDR27A2RRH5 827 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 CTAGE15A4D2H0 777 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 CCDC85CA6NKD9 419 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 EFCAB8A8MWE9 144 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 F8VP50 259 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 PIK3R2O00459 728 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 TNFRSF10BO14763 440 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 SRGAP2O75044 1071 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 DAB1O75553 588 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 FGF18O76093 207 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 ABLIM3O94929 683 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 RTN3O95197 1032 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-209ENST00000560463 GJB6O95452 261 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 OR4Q2P0C623 313 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 LINC00271P0C7V0 271 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 CTAGE8P0CG41 777 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 CXCR5P32302 372 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 OR1D2P34982 312 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 NOS2P35228 1153 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 FLT3P36888 993 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 CETN2P41208 172 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 MATKP42679 507 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 TUFMP49411 452 aaKnown RBP9.02□□□□□ -0.97
TRAF3-209ENST00000560463 RNASE9P60153 205 aaKnown RBP9.02□□□□□ -0.97
TRAF3-209ENST00000560463 RPL10AP62906 217 aaKnown RBP9.02□□□□□ -0.97
TRAF3-209ENST00000560463 ROR1Q01973 937 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 OGDHQ02218 1023 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 UBE3AQ05086 875 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 ADCY1Q08828 1119 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 SEL1L2Q5TEA6 688 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 PRSS55Q6UWB4 352 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-209ENST00000560463 STRADAQ7RTN6 431 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 CTAGE6Q86UF2 777 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 CTAGE4Q8IX94 777 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 KATNAL2Q8IYT4 538 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 VPS52Q8N1B4 723 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 NUP93Q8N1F7 819 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 EMC1Q8N766 993 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 EXD1Q8NHP7 514 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 ZNF461Q8TAF7 563 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 CLEC4CQ8WTT0 213 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 MAIP1Q8WWC4 291 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 CENPIQ92674 756 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-209ENST00000560463 KHSRPQ92945 711 aaKnown RBP eCLIP9.02□□□□□ -0.975e-6■□□□□ 10.9
TRAF3-209ENST00000560463 NT5C3BQ969T7 300 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 PIWIL1Q96J94 861 aaKnown RBP9.02□□□□□ -0.97
TRAF3-209ENST00000560463 SPATA17Q96L03 361 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 SAMD11Q96NU1 681 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 CLSTN3Q9BQT9 956 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 CARD6Q9BX69 1037 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 ULBP1Q9BZM6 244 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 ZBP1Q9H171 429 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 MRPL17Q9NRX2 175 aaKnown RBP9.02□□□□□ -0.97
TRAF3-209ENST00000560463 EHD2Q9NZN4 543 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 AFF4Q9UHB7 1163 aaKnown RBP9.02□□□□□ -0.97
TRAF3-209ENST00000560463 STAP1Q9ULZ2 295 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 USTQ9Y2C2 406 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 NOTCH4Q99466 2003 aa9.02□□□□□ -0.97
TRAF3-209ENST00000560463 C5orf67F2Z3F1 127 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 PGRMC1O00264 195 aaKnown RBP9.01□□□□□ -0.97
TRAF3-209ENST00000560463 CAPN9O14815 690 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 ZNF185O15231 689 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 CEP104O60308 925 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 LRCH4O75427 683 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 GRAP2O75791 330 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 ENDOD1O94919 500 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 LTFP02788 710 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 RB1P06400 928 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms