RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 TNK2Q07912 1038 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 MTF1Q14872 753 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 UBXN2BQ14CS0 331 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 ANGPT1Q15389 498 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 ITPRIPL2Q3MIP1 535 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 RAB41Q5JT25 222 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 ANKRD52Q8NB46 1076 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 GPT2Q8TD30 523 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 SH3RF2Q8TEC5 729 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 FBXO32Q969P5 355 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 JAKMIP2Q96AA8 810 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 ZFRQ96KR1 1074 aaKnown RBP13.97□□□□□ -0.17
SMAD3-213ENST00000560175 HEXIM2Q96MH2 286 aaKnown RBP13.97□□□□□ -0.17
SMAD3-213ENST00000560175 IER2Q9BTL4 223 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 NUP62CLQ9H1M0 184 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 CHRDQ9H2X0 955 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 TRPC7Q9HCX4 862 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 CNTN6Q9UQ52 1028 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.97□□□□□ -0.17
SMAD3-213ENST00000560175 AFPP02771 609 aaKnown RBP13.96□□□□□ -0.17
SMAD3-213ENST00000560175 RFX1P22670 979 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 ADORA2BP29275 332 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 NBL1P41271 181 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 YWHAEP62258 255 aaKnown RBP13.96□□□□□ -0.17
SMAD3-213ENST00000560175 CETN1Q12798 172 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 EML3Q32P44 896 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 PKDCCQ504Y2 493 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 ZNF394Q53GI3 561 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 TXNDC11Q6PKC3 985 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 GPRIN1Q7Z2K8 1008 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 CCDC186Q7Z3E2 898 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 NELL1Q92832 810 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 NT5C1BQ96P26 610 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 GBP4Q96PP9 640 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 CYLDQ9NQC7 956 aa13.96□□□□□ -0.17
SMAD3-213ENST00000560175 MYOFQ9NZM1 2061 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 MYO16Q9Y6X6 1858 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 GTPBP10A4D1E9 387 aaKnown RBP13.95□□□□□ -0.18
SMAD3-213ENST00000560175 RNF225M0QZC1 329 aaPredicted RBP13.95□□□□□ -0.18
SMAD3-213ENST00000560175 LEFTY2O00292 366 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 TRDMT1O14717 391 aaKnown RBP13.95□□□□□ -0.18
SMAD3-213ENST00000560175 COCHO43405 550 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 PAEPP09466 180 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 VDRP11473 427 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 SOX9P48436 509 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 KPNA1P52294 538 aaPredicted RBP13.95□□□□□ -0.18
SMAD3-213ENST00000560175 ZNF132P52740 706 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 CCINQ13939 588 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 ZNF528Q3MIS6 628 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 DPCR1Q3MIW9 517 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 TMEM196Q5HYL7 178 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 HECTD3Q5T447 861 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 TRIM68Q6AZZ1 485 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 CC2D1AQ6P1N0 951 aaPredicted RBP13.95□□□□□ -0.18
SMAD3-213ENST00000560175 KLHDC10Q6PID8 442 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 TTC30AQ86WT1 665 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 ADGRG2Q8IZP9 1017 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 LINC00597Q9H2U6 94 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 EBF3Q9H4W6 596 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 THAP9Q9H5L6 903 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 ECT2Q9H8V3 914 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 LMAN1LQ9HAT1 526 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 TLR8Q9NR97 1041 aaKnown RBP13.95□□□□□ -0.18
SMAD3-213ENST00000560175 DUS2Q9NX74 493 aaKnown RBP13.95□□□□□ -0.18
SMAD3-213ENST00000560175 GMIPQ9P107 970 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 FBXO4Q9UKT5 387 aa13.95□□□□□ -0.18
SMAD3-213ENST00000560175 E2F8A0AVK6 867 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 O00370 1275 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 ARSAP15289 507 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 GJA4P35212 333 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 PSEN1P49768 467 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 LRMPQ12912 555 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 GAS6Q14393 721 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 CNGA2Q16280 664 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 DGKKQ5KSL6 1271 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 PM20D1Q6GTS8 502 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 LCLAT1Q6UWP7 414 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 SCD5Q86SK9 330 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 DDX42Q86XP3 938 aaKnown RBP eCLIP13.94□□□□□ -0.18
SMAD3-213ENST00000560175 ARHGEF19Q8IW93 802 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 SYNPOQ8N3V7 929 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 KAT5Q92993 513 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 CNOT6LQ96LI5 555 aaKnown RBP13.94□□□□□ -0.18
SMAD3-213ENST00000560175 KREMEN1Q96MU8 473 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 PHOX2BQ99453 314 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 CCSER2Q9H7U1 834 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 NMUR1Q9HB89 426 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 OSER1Q9NX31 292 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 CLIC5Q9NZA1 410 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 NDRG2Q9UN36 371 aaKnown RBP13.94□□□□□ -0.18
SMAD3-213ENST00000560175 CPQQ9Y646 472 aa13.94□□□□□ -0.18
SMAD3-213ENST00000560175 XPO1O14980 1071 aaKnown RBP13.93□□□□□ -0.18
SMAD3-213ENST00000560175 GREM1O60565 184 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 TLR5O60602 858 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 PAPSS2O95340 614 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-213ENST00000560175 SP9P0CG40 484 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 PRKCSHP14314 528 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-213ENST00000560175 AMPD2Q01433 879 aa13.93□□□□□ -0.18
SMAD3-213ENST00000560175 IFRD2Q12894 506 aaPredicted RBP13.93□□□□□ -0.18
SMAD3-213ENST00000560175 GAB4Q2WGN9 574 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms