RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 VIPR2P41587 438 aa17.75■□□□□ 0.43
RPL28-209ENST00000560055 JAM2P57087 298 aa17.75■□□□□ 0.43
RPL28-209ENST00000560055 TPM4P67936 248 aa17.75■□□□□ 0.43
RPL28-209ENST00000560055 ZXDAP98168 799 aa17.75■□□□□ 0.43
RPL28-209ENST00000560055 NR1I3Q14994 352 aa17.75■□□□□ 0.43
RPL28-209ENST00000560055 CCDC186Q7Z3E2 898 aa17.75■□□□□ 0.43
RPL28-209ENST00000560055 UBALD2Q8IYN6 164 aa17.75■□□□□ 0.43
RPL28-209ENST00000560055 KCTD13Q8WZ19 329 aa17.75■□□□□ 0.43
RPL28-209ENST00000560055 SLC22A12Q96S37 553 aa17.75■□□□□ 0.43
RPL28-209ENST00000560055 GMIPQ9P107 970 aa17.75■□□□□ 0.43
RPL28-209ENST00000560055 NUP210Q8TEM1 1887 aaPredicted RBP17.74■□□□□ 0.43
RPL28-209ENST00000560055 A0A1W2PQC6 194 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 GOLGA6L19H0YKK7 550 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 M0QYV0 167 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 NARSO43776 548 aaKnown RBP17.74■□□□□ 0.43
RPL28-209ENST00000560055 GPD2P43304 727 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 PGFP49763 221 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 TUBP50607 506 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 POLR2FP61218 127 aaKnown RBP17.74■□□□□ 0.43
RPL28-209ENST00000560055 FANCCQ00597 558 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 FILIP1LQ4L180 1135 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 VITQ6UXI7 678 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 SLC47A2Q86VL8 602 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 NEK11Q8NG66 645 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 EDAQ92838 391 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 SECISBP2LQ93073 1101 aaKnown RBP17.74■□□□□ 0.43
RPL28-209ENST00000560055 E2F7Q96AV8 911 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 LRRC3BQ96PB8 259 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 OBP2AQ9NY56 170 aa17.74■□□□□ 0.43
RPL28-209ENST00000560055 CHORDC1Q9UHD1 332 aaPredicted RBP17.74■□□□□ 0.43
RPL28-209ENST00000560055 TRAV19A0A0A6YYK7 116 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 HEPACAM2A8MVW5 462 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 THAP12O43422 761 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 MED7O43513 233 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 GABBR2O75899 941 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 SERPINC1P01008 464 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 CFHP08603 1231 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 SRFP11831 508 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 AVPR1AP37288 418 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 RPL34P49207 117 aaKnown RBP17.73■□□□□ 0.43
RPL28-209ENST00000560055 PTK2Q05397 1052 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 FCHO2Q0JRZ9 810 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 ZNF268Q14587 947 aaPredicted RBP17.73■□□□□ 0.43
RPL28-209ENST00000560055 PMF1Q6P1K2 205 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 DENND1BQ6P3S1 775 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 MFSD6LQ8IWD5 586 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 ARL14EPQ8N8R7 260 aaPredicted RBP17.73■□□□□ 0.43
RPL28-209ENST00000560055 DEPDC1BQ8WUY9 529 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 USP13Q92995 863 aaPredicted RBP17.73■□□□□ 0.43
RPL28-209ENST00000560055 CYP2S1Q96SQ9 504 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 SMG9Q9H0W8 520 aaKnown RBP17.73■□□□□ 0.43
RPL28-209ENST00000560055 TRPC7Q9HCX4 862 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 SLC2A4RGQ9NR83 387 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 PCDHGC3Q9UN70 934 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 CCL26Q9Y258 94 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 HCN4Q9Y3Q4 1203 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 WDFY4Q6ZS81 3184 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 MUC6Q6W4X9 2439 aa17.73■□□□□ 0.43
RPL28-209ENST00000560055 HDCP19113 662 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 PLA2G5P39877 138 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 PDE6CP51160 858 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 TKTL1P51854 596 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 BPIFB4P59827 614 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 PM20D1Q6GTS8 502 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 HFE2Q6ZVN8 426 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 BHLHA9Q7RTU4 235 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 GPIHBP1Q8IV16 184 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 SCML4Q8N228 414 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 CELF5Q8N6W0 485 aaKnown RBP17.72■□□□□ 0.43
RPL28-209ENST00000560055 RIN3Q8TB24 985 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 HSFY1Q96LI6 401 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 PCMTD1Q96MG8 357 aaPredicted RBP17.72■□□□□ 0.43
RPL28-209ENST00000560055 RNF38Q9H0F5 515 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 KIF9Q9HAQ2 790 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 NMUR1Q9HB89 426 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 NLRC4Q9NPP4 1024 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 CYLDQ9NQC7 956 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 TLR8Q9NR97 1041 aaKnown RBP17.72■□□□□ 0.43
RPL28-209ENST00000560055 TDP1Q9NUW8 608 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 OSER1Q9NX31 292 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 ARHGAP26Q9UNA1 814 aa17.72■□□□□ 0.43
RPL28-209ENST00000560055 ABL1P00519 1130 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 CKMP06732 381 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 USP17L7P0C7H9 530 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 CYP11B1P15538 503 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 PSMC3P17980 439 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 SOX5P35711 763 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 PBX1P40424 430 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 SLC7A9P82251 487 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 SIGLEC14Q08ET2 396 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 ADIGQ0VDE8 80 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 HECTD3Q5T447 861 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 SCD5Q86SK9 330 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 STK32AQ8WU08 396 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 DDX1Q92499 740 aaKnown RBP17.71■□□□□ 0.43
RPL28-209ENST00000560055 FAM122AQ96E09 287 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 ASIC4Q96FT7 647 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 ULBP1Q9BZM6 244 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 LHX5Q9H2C1 402 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 LRRC4Q9HBW1 653 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms