RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 MIR1-1HGQ9H1L0 117 aa11.51□□□□□ -0.57
TRAF3-207ENST00000559734 SLC6A17Q9H1V8 727 aa11.51□□□□□ -0.57
TRAF3-207ENST00000559734 FAM124BQ9H5Z6 455 aaPredicted RBP11.51□□□□□ -0.57
TRAF3-207ENST00000559734 PRDM16Q9HAZ2 1276 aa11.51□□□□□ -0.57
TRAF3-207ENST00000559734 EHD2Q9NZN4 543 aa11.51□□□□□ -0.57
TRAF3-207ENST00000559734 DEC1Q9P2X7 70 aa11.51□□□□□ -0.57
TRAF3-207ENST00000559734 SH3BP1Q9Y3L3 701 aa11.51□□□□□ -0.57
TRAF3-207ENST00000559734 R3HCC1Q9Y3T6 440 aaKnown RBP11.51□□□□□ -0.57
TRAF3-207ENST00000559734 PI4KAP42356 2102 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 TULP3O75386 442 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 PDGFRBP09619 1106 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 IRF1P10914 325 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 LMO2P25791 158 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 NTSR1P30989 418 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 ABCD1P33897 745 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 TAF10Q12962 218 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 WDR45BQ5MNZ6 344 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 EGFLAMQ63HQ2 1017 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 SDE2Q6IQ49 451 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 VSTM1Q6UX27 236 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 HS2ST1Q7LGA3 356 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 DDX42Q86XP3 938 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRAF3-207ENST00000559734 MIB1Q86YT6 1006 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 PHTF2Q8N3S3 785 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 ZCCHC9Q8N567 271 aaKnown RBP11.5□□□□□ -0.57
TRAF3-207ENST00000559734 KCTD17Q8N5Z5 321 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 LRRC52Q8N7C0 313 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 TERB1Q8NA31 727 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 IPO4Q8TEX9 1081 aaKnown RBP11.5□□□□□ -0.57
TRAF3-207ENST00000559734 SPATA17Q96L03 361 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 SLITRK1Q96PX8 696 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 FIZ1Q96SL8 496 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 ACOX2Q99424 681 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 MTMR12Q9C0I1 747 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 IL21RQ9HBE5 538 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 CRTAC1Q9NQ79 661 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 RBAKQ9NYW8 714 aaPredicted RBP11.5□□□□□ -0.57
TRAF3-207ENST00000559734 TBC1D14Q9P2M4 693 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 PCOLCE2Q9UKZ9 415 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 LIMCH1Q9UPQ0 1083 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 RAD54BQ9Y620 910 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 DSPP15924 2871 aaKnown RBP11.5□□□□□ -0.57
TRAF3-207ENST00000559734 ANAPC1Q9H1A4 1944 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 PLXND1Q9Y4D7 1925 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 GON4LQ3T8J9 2241 aa11.5□□□□□ -0.57
TRAF3-207ENST00000559734 A0A0A0MRY4 1105 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 FAM149AA5PLN7 773 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 GOLGA8IPA6NC78 632 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 GOLGA8JA6NMD2 632 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 F8VP50 259 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 GABRDO14764 452 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 TRIM66O15016 1216 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 TRIM24O15164 1050 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 OLFM2O95897 454 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 OAS1P00973 400 aaKnown RBP11.49□□□□□ -0.57
TRAF3-207ENST00000559734 TMEM191BP0C7N4 346 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 DDIT3P35638 169 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 UBA7P41226 1012 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 PPP3CCP48454 512 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 RBP5P82980 135 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 POSTNQ15063 836 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 MAPRE1Q15691 268 aaKnown RBP11.49□□□□□ -0.57
TRAF3-207ENST00000559734 SOWAHAQ2M3V2 549 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 PREPLQ4J6C6 727 aaPredicted RBP11.49□□□□□ -0.57
TRAF3-207ENST00000559734 MDH1BQ5I0G3 518 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 TDRD10Q5VZ19 366 aaKnown RBP11.49□□□□□ -0.57
TRAF3-207ENST00000559734 GRAMD4Q6IC98 578 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 FAM171BQ6P995 826 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 TMPRSS7Q7RTY8 843 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 BRSK2Q8IWQ3 736 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 ZSWIM2Q8NEG5 633 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 PIP4K2CQ8TBX8 421 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 FOXJ1Q92949 421 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 PCED1BQ96HM7 432 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 UBL7Q96S82 380 aaPredicted RBP11.49□□□□□ -0.57
TRAF3-207ENST00000559734 TTLL2Q9BWV7 592 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 GAREM1Q9H706 876 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 GDAP2Q9NXN4 497 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 ITGA11Q9UKX5 1188 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 CDH9Q9ULB4 789 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 STYXL1Q9Y6J8 313 aa11.49□□□□□ -0.57
TRAF3-207ENST00000559734 A0A1B0GTW7 788 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 A0A1W2PQF6 199 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 E2F8A0AVK6 867 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 TRABD2BA6NFA1 517 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 CBFA2T3O75081 653 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 ATXN1LP0C7T5 689 aaKnown RBP11.48□□□□□ -0.57
TRAF3-207ENST00000559734 ADSSP30520 456 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 ABCG1P45844 678 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 POU5F1Q01860 360 aaKnown RBP11.48□□□□□ -0.57
TRAF3-207ENST00000559734 MYO1EQ12965 1108 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 SFR1Q86XK3 245 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 BBS7Q8IWZ6 715 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 ETFBKMTQ8IXQ9 262 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 KIAA1958Q8N8K9 716 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 KRI1Q8N9T8 703 aaKnown RBP11.48□□□□□ -0.57
TRAF3-207ENST00000559734 KCNV2Q8TDN2 545 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 RHBDD1Q8TEB9 315 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 SCFD1Q8WVM8 642 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 RAD54LQ92698 747 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms