RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 P2RY11Q96G91 374 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 KCNK16Q96T55 309 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 DUSP9Q99956 384 aaKnown RBP11.81□□□□□ -0.52
HERC1-204ENST00000559715 TNMDQ9H2S6 317 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 UPF2Q9HAU5 1272 aaKnown RBP11.81□□□□□ -0.52
HERC1-204ENST00000559715 AGPAT3Q9NRZ7 376 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 SMPD4Q9NXE4 827 aa11.81□□□□□ -0.52
HERC1-204ENST00000559715 TRIM24O15164 1050 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 EIF3DO15371 548 aaKnown RBP eCLIP11.8□□□□□ -0.52
HERC1-204ENST00000559715 COCHO43405 550 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 KAT7O95251 611 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 TNNC2P02585 160 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 SPINK2P20155 84 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 CSRP1P21291 193 aaKnown RBP11.8□□□□□ -0.52
HERC1-204ENST00000559715 CASP1P29466 404 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 PPP3CCP48454 512 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 NOVA1P51513 510 aaKnown RBP11.8□□□□□ -0.52
HERC1-204ENST00000559715 MYL6P60660 151 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 CLDN10P78369 228 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 SURF1Q15526 300 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 WDR72Q3MJ13 1102 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 LY6G5CQ5SRR4 150 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 SH3PXD2AQ5TCZ1 1133 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 SHC4Q6S5L8 630 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 MIB1Q86YT6 1006 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 CCDC65Q8IXS2 484 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 KDF1Q8NAX2 398 aaPredicted RBP11.8□□□□□ -0.52
HERC1-204ENST00000559715 RDH13Q8NBN7 331 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 ZMIZ2Q8NF64 920 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 SCAMP5Q8TAC9 235 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 NOC3LQ8WTT2 800 aaKnown RBP11.8□□□□□ -0.52
HERC1-204ENST00000559715 GATA6Q92908 595 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 EXOC4Q96A65 974 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 ELMO3Q96BJ8 720 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 PNKPQ96T60 521 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 MMS19Q96T76 1030 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 CGRRF1Q99675 332 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 SDCBP2Q9H190 292 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 VRTNQ9H8Y1 702 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 CFAP97Q9P2B7 532 aa11.8□□□□□ -0.52
HERC1-204ENST00000559715 EVLQ9UI08 416 aaPredicted RBP11.8□□□□□ -0.52
HERC1-204ENST00000559715 TRIM66O15016 1216 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 KHNYNO15037 678 aaKnown RBP11.79□□□□□ -0.52
HERC1-204ENST00000559715 CLIC2O15247 247 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 KLF8O95600 359 aaPredicted RBP11.79□□□□□ -0.52
HERC1-204ENST00000559715 CEACAM1P13688 526 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 PDCP20941 246 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 GBP1P32455 592 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 TIE1P35590 1138 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 TXLNAP40222 546 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 TNFRSF4P43489 277 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 CASP4P49662 377 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 PDE6CP51160 858 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 CDH8P55286 799 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 BMT2Q1RMZ1 405 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 PIP4P1Q86T03 277 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 C12orf56Q8IXR9 622 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 NUP93Q8N1F7 819 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 B3GALNT2Q8NCR0 500 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 C7orf25Q9BPX7 421 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 KIAA1586Q9HCI6 787 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 TMEM9BQ9NQ34 198 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 CHORDC1Q9UHD1 332 aaPredicted RBP11.79□□□□□ -0.52
HERC1-204ENST00000559715 PLXNB3Q9ULL4 1909 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 CABIN1Q9Y6J0 2220 aa11.79□□□□□ -0.52
HERC1-204ENST00000559715 KALRNO60229 2985 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 A0A1W2PQF6 199 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 E2F8A0AVK6 867 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 TULP1O00294 542 aaPredicted RBP11.78□□□□□ -0.52
HERC1-204ENST00000559715 BEST1O76090 585 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 VNN1O95497 513 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 CAPNS1P04632 268 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 DLATP10515 647 aaKnown RBP11.78□□□□□ -0.52
HERC1-204ENST00000559715 GRIA2P42262 883 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 ZNF252P-AS1Q0IIN9 211 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 HSF5Q4G112 596 aaPredicted RBP11.78□□□□□ -0.52
HERC1-204ENST00000559715 FAM26FQ5R3K3 315 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 TDRD10Q5VZ19 366 aaKnown RBP11.78□□□□□ -0.52
HERC1-204ENST00000559715 UNQ6494/PRO21346Q6UXR6 183 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 HS2ST1Q7LGA3 356 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 CYP2U1Q7Z449 544 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 C11orf74Q86VG3 221 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 TMEM25Q86YD3 366 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 TMEFF1Q8IYR6 380 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 FUKQ8N0W3 1084 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 SPDYE1Q8NFV5 336 aaPredicted RBP11.78□□□□□ -0.52
HERC1-204ENST00000559715 OR6B3Q8NGW1 331 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 CCDC26Q8TAB7 109 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 PIGKQ92643 395 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 CCDC127Q96BQ5 260 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 INTS4Q96HW7 963 aaKnown RBP11.78□□□□□ -0.52
HERC1-204ENST00000559715 ELOVL4Q9GZR5 314 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 SMYD3Q9H7B4 428 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 CCSER2Q9H7U1 834 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 PILRBQ9UKJ0 227 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 APC2O95996 2303 aa11.78□□□□□ -0.52
HERC1-204ENST00000559715 SLC9A3R1O14745 358 aaPredicted RBP11.77□□□□□ -0.53
HERC1-204ENST00000559715 HOXC11O43248 304 aaPredicted RBP11.77□□□□□ -0.53
HERC1-204ENST00000559715 PPP6R2O75170 966 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms