RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 SNX25Q9H3E2 840 aa17.31■□□□□ 0.36
CDC42BPB-205ENST00000559245 SLC32A1Q9H598 525 aa17.31■□□□□ 0.36
CDC42BPB-205ENST00000559245 ATXN2Q99700 1313 aaKnown RBP17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 TCRBV21S2A2A0A5A6 115 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 MBL2P11226 248 aaPredicted RBP17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 DPP6P42658 865 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 CACNA2D1P54289 1103 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 SPDYCQ5MJ68 293 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 LY6G5CQ5SRR4 150 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 LYSMD4Q5XG99 296 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 SLC23A3Q6PIS1 610 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 TRAPPC11Q7Z392 1133 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 WDR49Q8IV35 697 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 CCDC65Q8IXS2 484 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 GLIS3Q8NEA6 775 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 OR6B3Q8NGW1 331 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 TMEM30AQ9NV96 361 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 HSPBP1Q9NZL4 362 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 TBC1D14Q9P2M4 693 aa17.3■□□□□ 0.36
CDC42BPB-205ENST00000559245 DSPP15924 2871 aaKnown RBP17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 A0A087X0B3 334 aa17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 SRRM3A6NNA2 597 aaPredicted RBP17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 HYAL3O43820 417 aaPredicted RBP17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 TACC1O75410 805 aa17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 CST3P01034 146 aaPredicted RBP17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 PTPN1P18031 435 aaKnown RBP17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 ITPKAP23677 461 aa17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 CEBPZQ03701 1054 aaKnown RBP17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 STXBP4Q6ZWJ1 553 aa17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 PHTF2Q8N3S3 785 aa17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 ZNF518BQ9C0D4 1074 aa17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 ELOVL4Q9GZR5 314 aa17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 KIAA1586Q9HCI6 787 aa17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 PILRBQ9UKJ0 227 aa17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 DMXL2Q8TDJ6 3036 aa17.29■□□□□ 0.36
CDC42BPB-205ENST00000559245 E2F8A0AVK6 867 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 CLDN5O00501 218 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 CFIP05156 583 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 YWHAQP27348 245 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 GAD2Q05329 585 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 SEMA3BQ13214 749 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 PEAR1Q5VY43 1037 aaPredicted RBP17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 FAM173BQ6P4H8 233 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 PIP4P1Q86T03 277 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 NUP93Q8N1F7 819 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 NAT16Q8N8M0 369 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 ZCCHC14Q8WYQ9 949 aaKnown RBP17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 HPS3Q969F9 1004 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 FBXO32Q969P5 355 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 DPEP3Q9H4B8 488 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 NEUROG3Q9Y4Z2 214 aa17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 ANKRD11Q6UB99 2663 aaPredicted RBP17.28■□□□□ 0.36
CDC42BPB-205ENST00000559245 SPAARA0A1B0GVQ0 90 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 TBC1D3BA6NDS4 549 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 UPK3BL1B0FP48 263 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 UPK3BL2E5RIL1 263 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 AP5Z1O43299 807 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 COCHO43405 550 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 RTN3O95197 1032 aaPredicted RBP17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 FAM163BP0C2L3 166 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 DLATP10515 647 aaKnown RBP17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 HOXB3P14651 431 aaPredicted RBP17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 TNNI1P19237 187 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 HOXD12P35452 270 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 HOXD13P35453 343 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 ATXN3P54252 364 aaPredicted RBP17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 TNNC1P63316 161 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 SIM1P81133 766 aaPredicted RBP17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 RPL6Q02878 288 aaKnown RBP17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 COL9A2Q14055 689 aaPredicted RBP17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 DUOXA1Q1HG43 343 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 WDR72Q3MJ13 1102 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 ETFBKMTQ8IXQ9 262 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 ZNF513Q8N8E2 541 aaPredicted RBP17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 RDH13Q8NBN7 331 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 PDZD8Q8NEN9 1154 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 OTUB2Q96DC9 234 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 ZFRQ96KR1 1074 aaKnown RBP17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 B3GNT5Q9BYG0 378 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 FSCN3Q9NQT6 498 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 KLK13Q9UKR3 277 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 SLC6A14Q9UN76 642 aa17.27■□□□□ 0.36
CDC42BPB-205ENST00000559245 FASNP49327 2511 aaKnown RBP17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 A8MXQ7 604 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 TULP3O75386 442 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 GABRG2P18507 467 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 SNRNP35Q16560 246 aaKnown RBP17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 PREPLQ4J6C6 727 aaPredicted RBP17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 BTBD8Q5XKL5 378 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 TRMT11Q7Z4G4 463 aaKnown RBP17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 HDDC3Q8N4P3 179 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 DEFB119Q8N690 84 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 PDILTQ8N807 584 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 B3GALNT2Q8NCR0 500 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 CEP76Q8TAP6 659 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 KCNV2Q8TDN2 545 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 OVCA2Q8WZ82 227 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 CGRRF1Q99675 332 aa17.26■□□□□ 0.35
CDC42BPB-205ENST00000559245 GTPBP2Q9BX10 602 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms