RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 PTPRJQ12913 1337 aa13.13□□□□□ -0.31
TRPM1-210ENST00000559179 TMEM8BA6NDV4 472 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 CLDN5O00501 218 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 AP5Z1O43299 807 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 RTN3O95197 1032 aaPredicted RBP13.12□□□□□ -0.31
TRPM1-210ENST00000559179 CST3P01034 146 aaPredicted RBP13.12□□□□□ -0.31
TRPM1-210ENST00000559179 EIF2DP41214 584 aaKnown RBP13.12□□□□□ -0.31
TRPM1-210ENST00000559179 WASP42768 502 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 PTGER3P43115 390 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 CYP2J2P51589 502 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 ASIC1P78348 528 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 AMPD3Q01432 767 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 RPL6Q02878 288 aaKnown RBP13.12□□□□□ -0.31
TRPM1-210ENST00000559179 GFPT1Q06210 699 aaPredicted RBP13.12□□□□□ -0.31
TRPM1-210ENST00000559179 LY6G5CQ5SRR4 150 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 HECTD3Q5T447 861 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 RHBDF2Q6PJF5 856 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 C12orf40Q86WS4 652 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
TRPM1-210ENST00000559179 HPS3Q969F9 1004 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 ERLEC1Q96DZ1 483 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 TTLL2Q9BWV7 592 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 ZNF518BQ9C0D4 1074 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 DEC1Q9P2X7 70 aa13.12□□□□□ -0.31
TRPM1-210ENST00000559179 EVLQ9UI08 416 aaPredicted RBP13.12□□□□□ -0.31
TRPM1-210ENST00000559179 SPAARA0A1B0GVQ0 90 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 E2F8A0AVK6 867 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 CLIC2O15247 247 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 HYAL3O43820 417 aaPredicted RBP13.11□□□□□ -0.31
TRPM1-210ENST00000559179 HNRNPLP14866 589 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRPM1-210ENST00000559179 ITPKAP23677 461 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 SIM1P81133 766 aaPredicted RBP13.11□□□□□ -0.31
TRPM1-210ENST00000559179 STK38Q15208 465 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 SNRNP35Q16560 246 aaKnown RBP13.11□□□□□ -0.31
TRPM1-210ENST00000559179 DUOXA1Q1HG43 343 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 GAB4Q2WGN9 574 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 C10orf76Q5T2E6 689 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 SLC36A4Q6YBV0 504 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 NELFCDQ8IXH7 590 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 RGL4Q8IZJ4 473 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 KIAA1958Q8N8K9 716 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 OLIG1Q8TAK6 271 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 CEP76Q8TAP6 659 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 ZCCHC14Q8WYQ9 949 aaKnown RBP13.11□□□□□ -0.31
TRPM1-210ENST00000559179 B3GNT5Q9BYG0 378 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 DPEP3Q9H4B8 488 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 FSCN3Q9NQT6 498 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 TMEM74BQ9NUR3 256 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 SLC6A14Q9UN76 642 aa13.11□□□□□ -0.31
TRPM1-210ENST00000559179 OPHN1O60890 802 aa13.1□□□□□ -0.31
TRPM1-210ENST00000559179 NDUFS2O75306 463 aa13.1□□□□□ -0.31
TRPM1-210ENST00000559179 TACC1O75410 805 aa13.1□□□□□ -0.31
TRPM1-210ENST00000559179 OAS1P00973 400 aaKnown RBP13.1□□□□□ -0.31
TRPM1-210ENST00000559179 HOXB2P14652 356 aa13.1□□□□□ -0.31
TRPM1-210ENST00000559179 BIRC3Q13489 604 aa13.1□□□□□ -0.31
TRPM1-210ENST00000559179 SLC23A3Q6PIS1 610 aa13.1□□□□□ -0.31
TRPM1-210ENST00000559179 KDF1Q8NAX2 398 aaPredicted RBP13.1□□□□□ -0.31
TRPM1-210ENST00000559179 B3GALNT2Q8NCR0 500 aa13.1□□□□□ -0.31
TRPM1-210ENST00000559179 GLIS3Q8NEA6 775 aa13.1□□□□□ -0.31
TRPM1-210ENST00000559179 SYAP1Q96A49 352 aaPredicted RBP13.1□□□□□ -0.31
TRPM1-210ENST00000559179 DHX58Q96C10 678 aa13.1□□□□□ -0.31
TRPM1-210ENST00000559179 OTUB2Q96DC9 234 aa13.1□□□□□ -0.31
TRPM1-210ENST00000559179 CGRRF1Q99675 332 aa13.1□□□□□ -0.31
TRPM1-210ENST00000559179 MBD1Q9UIS9 605 aaPredicted RBP13.1□□□□□ -0.31
TRPM1-210ENST00000559179 PCDHB9Q9Y5E1 797 aa13.1□□□□□ -0.31
TRPM1-210ENST00000559179 CNOT1A5YKK6 2376 aaKnown RBP13.1□□□□□ -0.31
TRPM1-210ENST00000559179 CHD8Q9HCK8 2581 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.09□□□□□ -0.31
TRPM1-210ENST00000559179 FRMD3A2A2Y4 597 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 COCHO43405 550 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 TULP3O75386 442 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 OLFM2O95897 454 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 FAM163BP0C2L3 166 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 TRIM21P19474 475 aaKnown RBP13.09□□□□□ -0.31
TRPM1-210ENST00000559179 KIR2DL1P43626 348 aaPredicted RBP13.09□□□□□ -0.31
TRPM1-210ENST00000559179 CACNA2D1P54289 1103 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 MYL6P60660 151 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 GOLGA8FQ08AF8 430 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 GOLGA8DPQ0D2H9 430 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 MESP2Q0VG99 397 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 MAP7D1Q3KQU3 841 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 SPDYCQ5MJ68 293 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 GRAMD4Q6IC98 578 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 LIMS2Q7Z4I7 341 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 RABEPKQ7Z6M1 372 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 CHPFQ8IZ52 775 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 XXYLT1Q8NBI6 393 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 SCFD1Q8WVM8 642 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 OVCA2Q8WZ82 227 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 TNIP3Q96KP6 325 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 XPO6Q96QU8 1125 aaKnown RBP13.09□□□□□ -0.31
TRPM1-210ENST00000559179 KCNK16Q96T55 309 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 TNMDQ9H2S6 317 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 DNAJC17Q9NVM6 304 aaKnown RBP13.09□□□□□ -0.31
TRPM1-210ENST00000559179 PILRBQ9UKJ0 227 aa13.09□□□□□ -0.31
TRPM1-210ENST00000559179 MYOFQ9NZM1 2061 aa13.08□□□□□ -0.32
TRPM1-210ENST00000559179 A0A087X0B3 334 aa13.08□□□□□ -0.32
TRPM1-210ENST00000559179 SRRM3A6NNA2 597 aaPredicted RBP13.08□□□□□ -0.32
TRPM1-210ENST00000559179 EIF3DO15371 548 aaKnown RBP eCLIP13.08□□□□□ -0.32
TRPM1-210ENST00000559179 EXOC3O60645 756 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms