RNA–Protein interactions for RNA: ENST00000559099.5

HMG20A-208, Transcript of high mobility group 20A, humanhuman

TSL 5

Gene HMG20A, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-208ENST00000559099 CDT1Q9H211 546 aa8.3□□□□□ -1.08
HMG20A-208ENST00000559099 C6orf106Q9H6K1 298 aaPredicted RBP8.3□□□□□ -1.08
HMG20A-208ENST00000559099 ZSWIM4Q9H7M6 989 aa8.3□□□□□ -1.08
HMG20A-208ENST00000559099 GEMIN8Q9NWZ8 242 aaKnown RBP8.3□□□□□ -1.08
HMG20A-208ENST00000559099 ATXN7L1Q9ULK2 861 aaPredicted RBP8.3□□□□□ -1.08
HMG20A-208ENST00000559099 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.3□□□□□ -1.08
HMG20A-208ENST00000559099 MED13LQ71F56 2210 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 PMS2P1A4D2B8 440 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 WIPF3A6NGB9 483 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 WASH3PC4AMC7 463 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 DFNA5O60443 496 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 NOL4O94818 638 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 AGFG2O95081 481 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 ADH1CP00326 375 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 ITGAVP06756 1048 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 NFICP08651 508 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 TYMPP19971 482 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 ACP1P24666 158 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 CD97P48960 835 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 RPL10AP62906 217 aaKnown RBP8.29□□□□□ -1.08
HMG20A-208ENST00000559099 ASIC1P78348 528 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 EPHA7Q15375 998 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 FUT11Q495W5 492 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 LY6G5CQ5SRR4 150 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 SFMBT2Q5VUG0 894 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 C1QL3Q5VWW1 255 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 APOA5Q6Q788 366 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 USP53Q70EK8 1073 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 MAEAQ7L5Y9 396 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 NAT16Q8N8M0 369 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 MIB2Q96AX9 1013 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 CCDC97Q96F63 343 aaPredicted RBP8.29□□□□□ -1.08
HMG20A-208ENST00000559099 TRMT2BQ96GJ1 504 aaKnown RBP8.29□□□□□ -1.08
HMG20A-208ENST00000559099 PRR11Q96HE9 360 aaPredicted RBP8.29□□□□□ -1.08
HMG20A-208ENST00000559099 MYRFLQ96LU7 910 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 SLC46A1Q96NT5 459 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 ELF4Q99607 663 aaPredicted RBP8.29□□□□□ -1.08
HMG20A-208ENST00000559099 KIFC3Q9BVG8 833 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 CCDC94Q9BW85 323 aaPredicted RBP8.29□□□□□ -1.08
HMG20A-208ENST00000559099 C2orf40Q9H1Z8 148 aa8.29□□□□□ -1.08
HMG20A-208ENST00000559099 RBM28Q9NW13 759 aaKnown RBP8.29□□□□□ -1.08
HMG20A-208ENST00000559099 ABI2Q9NYB9 513 aaPredicted RBP8.29□□□□□ -1.08
HMG20A-208ENST00000559099 VPS37CA5D8V6 355 aaPredicted RBP8.28□□□□□ -1.08
HMG20A-208ENST00000559099 CDRT15L2A8MXV6 281 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 HIP1O00291 1037 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 PPEF2O14830 753 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 USO1O60763 962 aaKnown RBP8.28□□□□□ -1.08
HMG20A-208ENST00000559099 CSO75390 466 aaKnown RBP8.28□□□□□ -1.08
HMG20A-208ENST00000559099 SLITRK3O94933 977 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 CSH1P0DML2 217 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 CSH2P0DML3 217 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 HDCP19113 662 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 ABCB4P21439 1286 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 EPHA8P29322 1005 aaPredicted RBP8.28□□□□□ -1.08
HMG20A-208ENST00000559099 GNA11P29992 359 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 CDC27P30260 824 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 OXTRP30559 389 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 MCM5P33992 734 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 GRIK1P39086 918 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 RARRES1P49788 294 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 KCNB1Q14721 858 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 SAFBQ15424 915 aaKnown RBP eCLIP8.28□□□□□ -1.08
HMG20A-208ENST00000559099 RTN1Q16799 776 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 PROX2Q3B8N5 592 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 SGO2Q562F6 1265 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 DHX32Q7L7V1 743 aaKnown RBP8.28□□□□□ -1.08
HMG20A-208ENST00000559099 KIAA1958Q8N8K9 716 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 SPPL2BQ8TCT7 592 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 SSC4DQ8WTU2 575 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 C2orf15Q8WU43 125 aaKnown RBP8.28□□□□□ -1.08
HMG20A-208ENST00000559099 FUCA2Q9BTY2 467 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 PCED1AQ9H1Q7 454 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 SLKQ9H2G2 1235 aaPredicted RBP8.28□□□□□ -1.08
HMG20A-208ENST00000559099 KDM4CQ9H3R0 1056 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 PTPRHQ9HD43 1115 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 KCNMB3Q9NPA1 279 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 SATB2Q9UPW6 733 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 TACC2O95359 2948 aa8.28□□□□□ -1.08
HMG20A-208ENST00000559099 A0A087WWV3 80 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 PRRT4C9JH25 899 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 ABLIM1O14639 778 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 HOXC11O43248 304 aaPredicted RBP8.27□□□□□ -1.09
HMG20A-208ENST00000559099 LYPLA2O95372 231 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 LRPAP1P30533 357 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 UQCRFS1P47985 274 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 OXCT1P55809 520 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 E2F1Q01094 437 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 GRIN1Q05586 938 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 ORC1Q13415 861 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 C3orf38Q5JPI3 329 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 PPP4R3AQ6IN85 833 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 SDE2Q6IQ49 451 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 DSTYKQ6XUX3 929 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 TPH2Q8IWU9 490 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 BIRC7Q96CA5 298 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 DEPDC7Q96QD5 511 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 NUP58Q9BVL2 599 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 ANKEF1Q9NU02 776 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 TMLHEQ9NVH6 421 aa8.27□□□□□ -1.09
HMG20A-208ENST00000559099 DEC1Q9P2X7 70 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms