RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 NOP14P78316 857 aaKnown RBP16.33■□□□□ 0.2
CPNE6-208ENST00000558795 SIM1P81133 766 aaPredicted RBP16.33■□□□□ 0.2
CPNE6-208ENST00000558795 KDSRQ06136 332 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 SPDYCQ5MJ68 293 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 RESP18Q5W5W9 173 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 SLC23A3Q6PIS1 610 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 SHC4Q6S5L8 630 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 USP49Q70CQ1 688 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 HS2ST1Q7LGA3 356 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 DDX42Q86XP3 938 aaKnown RBP eCLIP16.33■□□□□ 0.2
CPNE6-208ENST00000558795 SFTPA1Q8IWL2 248 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 GPD1LQ8N335 351 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 HDDC3Q8N4P3 179 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 MYCBPAPQ8TBZ2 947 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 DNAJC19Q96DA6 116 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 PCED1BQ96HM7 432 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 SLITRK1Q96PX8 696 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 MMS19Q96T76 1030 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 TTLL2Q9BWV7 592 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 RNF38Q9H0F5 515 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 OLFML3Q9NRN5 406 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 TMEM74BQ9NUR3 256 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 INTS13Q9NVM9 706 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 ATXN2Q99700 1313 aaKnown RBP16.33■□□□□ 0.2
CPNE6-208ENST00000558795 PLXND1Q9Y4D7 1925 aa16.33■□□□□ 0.2
CPNE6-208ENST00000558795 SPAARA0A1B0GVQ0 90 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 TCRBV21S2A2A0A5A6 115 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 F8VP50 259 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 KIAA0391O15091 583 aaKnown RBP16.32■□□□□ 0.2
CPNE6-208ENST00000558795 MBL2P11226 248 aaPredicted RBP16.32■□□□□ 0.2
CPNE6-208ENST00000558795 ADH5P11766 374 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 HOXB3P14651 431 aaPredicted RBP16.32■□□□□ 0.2
CPNE6-208ENST00000558795 WARSP23381 471 aaKnown RBP16.32■□□□□ 0.2
CPNE6-208ENST00000558795 RDXP35241 583 aaKnown RBP16.32■□□□□ 0.2
CPNE6-208ENST00000558795 HOXD12P35452 270 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 TNFRSF4P43489 277 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 SURF1Q15526 300 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 MDH1BQ5I0G3 518 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 EMC10Q5UCC4 262 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 TDRD10Q5VZ19 366 aaKnown RBP16.32■□□□□ 0.2
CPNE6-208ENST00000558795 RHBDF2Q6PJF5 856 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 CCDC73Q6ZRK6 1079 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 LIMS2Q7Z4I7 341 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 C12orf40Q86WS4 652 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 FRMD1Q8N878 549 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 OR5B17Q8NGF7 314 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 C8orf48Q96LL4 319 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 GTPBP2Q9BX10 602 aaKnown RBP16.32■□□□□ 0.2
CPNE6-208ENST00000558795 SNX25Q9H3E2 840 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 MYOFQ9NZM1 2061 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 TBC1D14Q9P2M4 693 aa16.32■□□□□ 0.2
CPNE6-208ENST00000558795 MBD1Q9UIS9 605 aaPredicted RBP16.32■□□□□ 0.2
CPNE6-208ENST00000558795 ZNF233A6NK53 670 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 AP5Z1O43299 807 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 OLFM2O95897 454 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 ITPKAP23677 461 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 KIR2DL1P43626 348 aaPredicted RBP16.31■□□□□ 0.2
CPNE6-208ENST00000558795 RPL6Q02878 288 aaKnown RBP16.31■□□□□ 0.2
CPNE6-208ENST00000558795 GFPT1Q06210 699 aaPredicted RBP16.31■□□□□ 0.2
CPNE6-208ENST00000558795 MESP2Q0VG99 397 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 IFRD2Q12894 506 aaPredicted RBP16.31■□□□□ 0.2
CPNE6-208ENST00000558795 TAF10Q12962 218 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 DUOXA2Q1HG44 320 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 MAP7D1Q3KQU3 841 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 BTBD8Q5XKL5 378 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 TRMT11Q7Z4G4 463 aaKnown RBP16.31■□□□□ 0.2
CPNE6-208ENST00000558795 ZDHHC4Q9NPG8 344 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 PILRBQ9UKJ0 227 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 SLC6A14Q9UN76 642 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 MSRB2Q9Y3D2 182 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 GON4LQ3T8J9 2241 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 PCNX2A6NKB5 2137 aa16.31■□□□□ 0.2
CPNE6-208ENST00000558795 ZFYVE26Q68DK2 2539 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 PTPRJQ12913 1337 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 CEP192Q8TEP8 1941 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 ADAMTS9Q9P2N4 1935 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 A0A0A0MRY4 1105 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 TBC1D3BA6NDS4 549 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 H0Y626 953 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 ADAM23O75077 832 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 PRPF6O94906 941 aaKnown RBP16.3■□□□□ 0.2
CPNE6-208ENST00000558795 TRIM16O95361 564 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 OAS1P00973 400 aaKnown RBP16.3■□□□□ 0.2
CPNE6-208ENST00000558795 SEMA3BQ13214 749 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 DUOXA1Q1HG43 343 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 PREPLQ4J6C6 727 aaPredicted RBP16.3■□□□□ 0.2
CPNE6-208ENST00000558795 LY6G5CQ5SRR4 150 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 NUDT18Q6ZVK8 323 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 RABEPKQ7Z6M1 372 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 PIP4P1Q86T03 277 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 CEP76Q8TAP6 659 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 ELOVL4Q9GZR5 314 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 PANK4Q9NVE7 773 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 KLK13Q9UKR3 277 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 LHX6Q9UPM6 363 aa16.3■□□□□ 0.2
CPNE6-208ENST00000558795 E2F8A0AVK6 867 aa16.29■□□□□ 0.2
CPNE6-208ENST00000558795 UPK3BL1B0FP48 263 aa16.29■□□□□ 0.2
CPNE6-208ENST00000558795 UPK3BL2E5RIL1 263 aa16.29■□□□□ 0.2
CPNE6-208ENST00000558795 OPHN1O60890 802 aa16.29■□□□□ 0.2
CPNE6-208ENST00000558795 CHRM1P11229 460 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms